RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 UNQ9370/PRO34162Q6UXP9 181 aa10.35□□□□□ -0.75
TRAPPC4-205ENST00000525079 RTN4RL2Q86UN3 420 aa10.35□□□□□ -0.75
TRAPPC4-205ENST00000525079 ZNF565Q8N9K5 539 aa10.35□□□□□ -0.75
TRAPPC4-205ENST00000525079 OR4C13Q8NGP0 309 aa10.35□□□□□ -0.75
TRAPPC4-205ENST00000525079 NEK7Q8TDX7 302 aa10.35□□□□□ -0.75
TRAPPC4-205ENST00000525079 CNBD2Q96M20 576 aa10.35□□□□□ -0.75
TRAPPC4-205ENST00000525079 ANKRD60Q9BZ19 345 aa10.35□□□□□ -0.75
TRAPPC4-205ENST00000525079 CCDC90BQ9GZT6 254 aa10.35□□□□□ -0.75
TRAPPC4-205ENST00000525079 VCX3BQ9H321 246 aa10.35□□□□□ -0.75
TRAPPC4-205ENST00000525079 BANF2Q9H503 90 aa10.35□□□□□ -0.75
TRAPPC4-205ENST00000525079 TCF7L1Q9HCS4 588 aa10.35□□□□□ -0.75
TRAPPC4-205ENST00000525079 PCDHB16Q9NRJ7 776 aa10.35□□□□□ -0.75
TRAPPC4-205ENST00000525079 CALYQ9NYX4 217 aa10.35□□□□□ -0.75
TRAPPC4-205ENST00000525079 DPM3Q9P2X0 92 aa10.35□□□□□ -0.75
TRAPPC4-205ENST00000525079 F2RL2O00254 374 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 RGS10O43665 173 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 ZNF780AO75290 641 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 IGLV1-47P01700 117 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 HSMCR30P0CW71 290 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 MAPK3P27361 379 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 KIR2DS4P43632 304 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 GPR176Q14439 515 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 HABP2Q14520 560 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 LIPKQ5VXJ0 399 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 CEACAM19Q7Z692 300 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 LYPD6Q86Y78 171 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 UBALD1Q8TB05 177 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 ZNF596Q8TC21 504 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 CCDC107Q8WV48 283 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 TMEM203Q969S6 136 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 KIRREL1Q96J84 757 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 CYYR1Q96J86 154 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 DUSP21Q9H596 190 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 IFT22Q9H7X7 185 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 RAB18Q9NP72 206 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 IDI2-AS1Q9NZ38 188 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 FBLN5Q9UBX5 448 aa10.34□□□□□ -0.75
TRAPPC4-205ENST00000525079 LEUTXA8MZ59 168 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 BUB1B-PAK6H3BSN5 160 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 CRTAPO75718 401 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 ATP6V1G2O95670 118 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 CRHBPP24387 322 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 CD34P28906 385 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 SSTR5P35346 364 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 MAP2K4P45985 399 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 KCNJ3P48549 501 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 PRRX1P54821 245 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 MPV17LQ2QL34 196 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 HLA-DRB5Q30154 266 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 RBM48Q5RL73 367 aaKnown RBP10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 TREML4Q6UXN2 200 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 LIAT1Q6ZQX7 453 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 LINC00596Q86U02 117 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 CDH26Q8IXH8 852 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 MS4A15Q8N5U1 240 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 TMEM104Q8NE00 496 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 FAM46BQ96A09 425 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 SELENOIQ9C0D9 397 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 NPFFR1Q9GZQ6 430 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 NCOR1P1Q9H4R4 102 aa10.33□□□□□ -0.76
TRAPPC4-205ENST00000525079 A0A087X0M5 115 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 A0A1B0GX30 115 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 A0A1W2PPE3 182 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 TMEM30CPA0ZSE6 113 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 NPIPB11E5RHQ5 1161 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 IL1AP01583 271 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 MGMTP16455 207 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 GNG10P50151 68 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 DYNLT3P51808 116 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 EFNB2P52799 333 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 RPS25P62851 125 aaKnown RBP10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 FBLN7Q53RD9 439 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 TPTE2P1Q5T6R2 138 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 FAM53AQ6NSI3 398 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 Q6ZS46 218 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 LRRTM1Q86UE6 522 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 NKAIN3Q8N8D7 197 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 C11orf44Q8N8P7 122 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 OR9G1Q8NH87 305 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 OR2T6Q8NHC8 308 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 THRSPQ92748 146 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 UFD1Q92890 307 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 ZNF702PQ9H963 129 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 PITPNC1Q9UKF7 332 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 PSG11Q9UQ72 335 aa10.32□□□□□ -0.76
TRAPPC4-205ENST00000525079 UBE2QL1A1L167 161 aa10.31□□□□□ -0.76
TRAPPC4-205ENST00000525079 FAM90A22PA8MWA6 464 aa10.31□□□□□ -0.76
TRAPPC4-205ENST00000525079 MCRIP1C9JLW8 97 aa10.31□□□□□ -0.76
TRAPPC4-205ENST00000525079 LY6LH3BQJ8 138 aa10.31□□□□□ -0.76
TRAPPC4-205ENST00000525079 J3QR06 171 aa10.31□□□□□ -0.76
TRAPPC4-205ENST00000525079 MT-ND4P03905 459 aa10.31□□□□□ -0.76
TRAPPC4-205ENST00000525079 VSIG10L2P0DP72 767 aa10.31□□□□□ -0.76
TRAPPC4-205ENST00000525079 CEACAM3P40198 252 aa10.31□□□□□ -0.76
TRAPPC4-205ENST00000525079 HSPA13P48723 471 aa10.31□□□□□ -0.76
TRAPPC4-205ENST00000525079 BLCAPP62952 87 aa10.31□□□□□ -0.76
TRAPPC4-205ENST00000525079 PAX5Q02548 391 aa10.31□□□□□ -0.76
TRAPPC4-205ENST00000525079 GPR50Q13585 617 aa10.31□□□□□ -0.76
TRAPPC4-205ENST00000525079 HSD17B12Q53GQ0 312 aa10.31□□□□□ -0.76
TRAPPC4-205ENST00000525079 OR10K2Q6IF99 312 aa10.31□□□□□ -0.76
TRAPPC4-205ENST00000525079 RAB12Q6IQ22 244 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms