RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 CCDC107Q8WV48 283 aa13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 THAP7Q9BT49 309 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 CCDC32Q9BV29 185 aa13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 SSBP3Q9BWW4 388 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 ZNF230Q9UIE0 474 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 TRAPPC2LQ9UL33 140 aa13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 CSMD2Q7Z408 3487 aa13.14□□□□□ -0.31
TSPAN4-213ENST00000524895 FCN3O75636 299 aa13.13□□□□□ -0.31
TSPAN4-213ENST00000524895 RBBP9O75884 186 aa13.13□□□□□ -0.31
TSPAN4-213ENST00000524895 RCVRNP35243 200 aa13.13□□□□□ -0.31
TSPAN4-213ENST00000524895 GLP1RP43220 463 aa13.13□□□□□ -0.31
TSPAN4-213ENST00000524895 WDR25Q64LD2 544 aaPredicted RBP13.13□□□□□ -0.31
TSPAN4-213ENST00000524895 MAFIPQ8WZ33 124 aa13.13□□□□□ -0.31
TSPAN4-213ENST00000524895 SDHCQ99643 169 aaPredicted RBP13.13□□□□□ -0.31
TSPAN4-213ENST00000524895 FOXC2Q99958 501 aa13.13□□□□□ -0.31
TSPAN4-213ENST00000524895 OCSTAMPQ9BR26 566 aa13.13□□□□□ -0.31
TSPAN4-213ENST00000524895 ST6GALNAC5Q9BVH7 336 aa13.13□□□□□ -0.31
TSPAN4-213ENST00000524895 ARID1AO14497 2285 aa13.13□□□□□ -0.31
TSPAN4-213ENST00000524895 TRGV10A0A0A0MS01 117 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 TRBV23-1A0A0A0MS06 115 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 TRBV6-6A0A0A6YYG2 114 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 TRAV39A0A0B4J263 110 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 hADV38S2A0JD32 116 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 POM121CA8CG34 1229 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 PHF1O43189 567 aaPredicted RBP13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 FCER2P06734 321 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 USF1P22415 310 aaPredicted RBP13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 GDNFP39905 211 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 INPP1P49441 399 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 LMO4P61968 165 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 RPL31P62899 125 aaKnown RBP13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 SSBP1Q04837 148 aaKnown RBP13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 C6orf183Q5T699 404 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 KRTAP1-3Q8IUG1 177 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 FAM185AQ8N0U4 392 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 GVQW1Q8N7I0 195 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 Q96MF0 132 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 NCOR1P1Q9H4R4 102 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 ZNF286AQ9HBT8 521 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 C19orf12Q9NSK7 152 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 OR6C3Q9NZP0 311 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 KLK11Q9UBX7 282 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 LPAR3Q9UBY5 353 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 MTFP1Q9UDX5 166 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 MGAT4AQ9UM21 535 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 PDZD2O15018 2839 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 ITPR2Q14571 2701 aa13.12□□□□□ -0.31
TSPAN4-213ENST00000524895 A0A1W2PQ09 198 aa13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 ORC5O43913 435 aa13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 IL7P13232 177 aa13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 RCC1P18754 421 aaPredicted RBP13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 MEF2CQ06413 473 aaPredicted RBP13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 BAK1Q16611 211 aa13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 ZNF880Q6PDB4 577 aa13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 TRAT1Q6PIZ9 186 aa13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 Q6ZPA2 131 aa13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 BTN2A1Q7KYR7 527 aa13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 HOGA1Q86XE5 327 aa13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 BEST4Q8NFU0 473 aa13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 OR13A1Q8NGR1 328 aa13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 MRGPRDQ8TDS7 321 aa13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 BORCS5Q969J3 196 aa13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 TRIM63Q969Q1 353 aa13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 DCTN5Q9BTE1 182 aa13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 Q9N2K0 584 aa13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 ABCB10Q9NRK6 738 aa13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 KCNIP1Q9NZI2 227 aa13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 ANAPC10Q9UM13 185 aa13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 RBMX2Q9Y388 322 aaKnown RBP13.11□□□□□ -0.31
TSPAN4-213ENST00000524895 ASH1LQ9NR48 2969 aaKnown RBP13.1□□□□□ -0.31
TSPAN4-213ENST00000524895 KIR2DS1A0A191URI9 304 aa13.1□□□□□ -0.31
TSPAN4-213ENST00000524895 MEX3AA1L020 520 aaKnown RBP13.1□□□□□ -0.31
TSPAN4-213ENST00000524895 LANCL1O43813 399 aa13.1□□□□□ -0.31
TSPAN4-213ENST00000524895 ECDO95905 644 aaPredicted RBP13.1□□□□□ -0.31
TSPAN4-213ENST00000524895 CSF1P09603 554 aa13.1□□□□□ -0.31
TSPAN4-213ENST00000524895 GSTT2BP0CG30 244 aa13.1□□□□□ -0.31
TSPAN4-213ENST00000524895 IL2RGP31785 369 aa13.1□□□□□ -0.31
TSPAN4-213ENST00000524895 KIR2DS4P43632 304 aa13.1□□□□□ -0.31
TSPAN4-213ENST00000524895 HLA-DRB3P79483 266 aa13.1□□□□□ -0.31
TSPAN4-213ENST00000524895 KIR2DS1Q14954 304 aa13.1□□□□□ -0.31
TSPAN4-213ENST00000524895 CD276Q5ZPR3 534 aa13.1□□□□□ -0.31
TSPAN4-213ENST00000524895 ZNF565Q8N9K5 539 aa13.1□□□□□ -0.31
TSPAN4-213ENST00000524895 MBNL3Q9NUK0 354 aaKnown RBP13.1□□□□□ -0.31
TSPAN4-213ENST00000524895 TAS2R8Q9NYW2 309 aa13.1□□□□□ -0.31
TSPAN4-213ENST00000524895 LINC00312Q9Y6C7 94 aa13.1□□□□□ -0.31
TSPAN4-213ENST00000524895 LOC105371242A0A075B767 164 aa13.09□□□□□ -0.31
TSPAN4-213ENST00000524895 A8MXK9 166 aa13.09□□□□□ -0.31
TSPAN4-213ENST00000524895 TRDCB7Z8K6 153 aa13.09□□□□□ -0.31
TSPAN4-213ENST00000524895 RNF223E7ERA6 249 aa13.09□□□□□ -0.31
TSPAN4-213ENST00000524895 FOXH1O75593 365 aa13.09□□□□□ -0.31
TSPAN4-213ENST00000524895 UPK1BO75841 260 aa13.09□□□□□ -0.31
TSPAN4-213ENST00000524895 HLA-DMAP28067 261 aa13.09□□□□□ -0.31
TSPAN4-213ENST00000524895 AP3S2P59780 193 aa13.09□□□□□ -0.31
TSPAN4-213ENST00000524895 ARPC4P59998 168 aa13.09□□□□□ -0.31
TSPAN4-213ENST00000524895 SRSF7Q16629 238 aaKnown RBP eCLIP13.09□□□□□ -0.31
TSPAN4-213ENST00000524895 C11orf91Q3C1V1 193 aa13.09□□□□□ -0.31
TSPAN4-213ENST00000524895 CHRFAM7AQ494W8 412 aa13.09□□□□□ -0.31
TSPAN4-213ENST00000524895 ZNF57Q68EA5 555 aaPredicted RBP13.09□□□□□ -0.31
TSPAN4-213ENST00000524895 OR52W1Q6IF63 320 aa13.09□□□□□ -0.31
TSPAN4-213ENST00000524895 C16orf87Q6PH81 154 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms