RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 IL2RGP31785 369 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 PRDX2P32119 198 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 GABRA2P47869 451 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 NKX2-5P52952 324 aaPredicted RBP8.42□□□□□ -1.06
VPS13B-212ENST00000524330 PIGPP57054 158 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 RND3P61587 244 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 TLE1Q04724 770 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 LY6DQ14210 128 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 ZNF660Q6AZW8 331 aaPredicted RBP8.42□□□□□ -1.06
VPS13B-212ENST00000524330 CLEC18BQ6UXF7 455 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 C17orf107Q6ZR85 190 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 ZNF826PQ6ZT77 177 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 NCCRP1Q6ZVX7 275 aaPredicted RBP8.42□□□□□ -1.06
VPS13B-212ENST00000524330 LRP11Q86VZ4 500 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 LGI3Q8N145 548 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 GAPTQ8N292 157 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 ASCC1Q8N9N2 400 aaKnown RBP8.42□□□□□ -1.06
VPS13B-212ENST00000524330 GALNT11Q8NCW6 608 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 GRPEL2Q8TAA5 225 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 THAP6Q8TBB0 222 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 RTN4IP1Q8WWV3 396 aaPredicted RBP8.42□□□□□ -1.06
VPS13B-212ENST00000524330 GALMQ96C23 342 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 PLPPR2Q96GM1 343 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 RTBDNQ9BSG5 229 aaPredicted RBP8.42□□□□□ -1.06
VPS13B-212ENST00000524330 CABLES2Q9BTV7 478 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 RSRP1Q9BUV0 290 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 SLC5A7Q9GZV3 580 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 NCOR1P1Q9H4R4 102 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 NAA60Q9H7X0 242 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 IL36RNQ9UBH0 155 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 HSPB11Q9Y547 144 aa8.42□□□□□ -1.06
VPS13B-212ENST00000524330 RBM7Q9Y580 266 aaKnown RBP8.42□□□□□ -1.06
VPS13B-212ENST00000524330 TRAV38-1A0A0B4J264 116 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 RFPL4AA6NLU0 287 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 HMSDA8MTL9 139 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 C17orf100A8MU93 164 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 RFPL4AL1F8VTS6 287 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 SPINT2O43291 252 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 GZMHP20718 246 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 AADACP22760 399 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 LUMP51884 338 aaPredicted RBP8.41□□□□□ -1.06
VPS13B-212ENST00000524330 SNRPD2P62316 118 aaKnown RBP8.41□□□□□ -1.06
VPS13B-212ENST00000524330 PAX5Q02548 391 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 COL10A1Q03692 680 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 SRSF4Q08170 494 aaKnown RBP8.41□□□□□ -1.06
VPS13B-212ENST00000524330 BAMBIQ13145 260 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 SMCO1Q147U7 214 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 SLC9A3R2Q15599 337 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 HMGN3Q15651 99 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 EFNB3Q15768 340 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 ADIPOQQ15848 244 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 NDUFA5Q16718 116 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 C4orf17Q53FE4 359 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 KRBOX4Q5JUW0 171 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 ZNF561Q8N587 486 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 BOLLQ8N9W6 283 aaKnown RBP8.41□□□□□ -1.06
VPS13B-212ENST00000524330 MRGPRFQ96AM1 343 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 GALNT14Q96FL9 552 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 AKR1E2Q96JD6 320 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 LURAP1Q96LR2 239 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 HS3ST6Q96QI5 342 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 NMES1Q9C002 83 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 FXYD6Q9H0Q3 95 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 FAM234AQ9H0X4 552 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 MBNL3Q9NUK0 354 aaKnown RBP8.41□□□□□ -1.06
VPS13B-212ENST00000524330 PPP1R3CQ9UQK1 317 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 OR2W1Q9Y3N9 320 aa8.41□□□□□ -1.06
VPS13B-212ENST00000524330 TRBV6-7A0A0A0MS04 114 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 IGHV3-64DA0A0J9YX35 117 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 C13orf42A0A1B0GVH6 325 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 DUXBA0A1W2PPF3 345 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 MED19A0JLT2 244 aaPredicted RBP8.4□□□□□ -1.06
VPS13B-212ENST00000524330 L7N2F9 121 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 CD8AP01732 235 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 RLN2P04090 185 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 SCTP09683 121 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 NFYAP23511 347 aaPredicted RBP8.4□□□□□ -1.06
VPS13B-212ENST00000524330 ATXN7L3Q14CW9 347 aaPredicted RBP8.4□□□□□ -1.06
VPS13B-212ENST00000524330 TMEM30BQ3MIR4 351 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 ESCO2Q56NI9 601 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 ADAM5Q6NVV9 412 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 ZBTB34Q8NCN2 500 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 OR10V1Q8NGI7 309 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 SECTM1Q8WVN6 248 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 IL1F10Q8WWZ1 152 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 SPIN2AQ99865 258 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 SPIN2BQ9BPZ2 258 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 TMEM246Q9BRR3 403 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 ZNF665Q9H7R5 613 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 SAP30LQ9HAJ7 183 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 TAF9BQ9HBM6 251 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 SLC2A9Q9NRM0 540 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 OR6C3Q9NZP0 311 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 ZNF581Q9P0T4 197 aa8.4□□□□□ -1.06
VPS13B-212ENST00000524330 UBE2J1Q9Y385 318 aaPredicted RBP8.4□□□□□ -1.06
VPS13B-212ENST00000524330 ESPL1Q14674 2120 aa8.39□□□□□ -1.07
VPS13B-212ENST00000524330 AKAP13Q12802 2813 aa8.39□□□□□ -1.07
VPS13B-212ENST00000524330 FXYD6-FXYD2A0A087WZ82 144 aa8.39□□□□□ -1.07
VPS13B-212ENST00000524330 A0A0D9SG52 128 aa8.39□□□□□ -1.07
VPS13B-212ENST00000524330 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms