RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 UQCC2Q9BRT2 126 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 NDEL1Q9GZM8 345 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 SRRQ9GZT4 340 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 REEP1Q9H902 201 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 DYRK4Q9NR20 520 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 MTFP1Q9UDX5 166 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 V9GYH0 126 aa3.79□□□□□ -1.8
SKP1-213ENST00000524288 TSPAN11A1L157 253 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 PDZK1P1A8MUH7 402 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 ZNF670-ZNF695F2Z2N8 137 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 CCRL2O00421 344 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 KDELR3O43731 214 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 MPZL2O60487 215 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 KRT75O95678 551 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 OXTP01178 125 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 PTHP01270 115 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 TLX1NBP0CAT3 122 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 MPC1LP0DKB6 136 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 IL7P13232 177 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 M6PRP20645 277 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 PRPS1L1P21108 318 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 OMGP23515 440 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 ERP29P30040 261 aaKnown RBP3.78□□□□□ -1.8
SKP1-213ENST00000524288 CDKN2CP42773 168 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 NKX2-5P52952 324 aaPredicted RBP3.78□□□□□ -1.8
SKP1-213ENST00000524288 SNRPGP62308 76 aaKnown RBP3.78□□□□□ -1.8
SKP1-213ENST00000524288 PSPHP78330 225 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 SEMG2Q02383 582 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 DGCR6Q14129 220 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 SSX1Q16384 188 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 TMEM255AQ5JRV8 349 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 NXNL2Q5VZ03 156 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 FAM92BQ6ZTR7 304 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 ZNF767PQ75MW2 155 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 RAB43Q86YS6 212 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 PLCZ1Q86YW0 608 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 CYP4Z2PQ8N1L4 340 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 TRAM1L1Q8N609 369 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 KRTCAP2Q8N6L1 136 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 CLDN22Q8N7P3 220 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 Q8N976 141 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 INO80EQ8NBZ0 244 aaPredicted RBP3.78□□□□□ -1.8
SKP1-213ENST00000524288 OR51F2Q8NH61 342 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 ZFAND1Q8TCF1 268 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 OPALINQ96PE5 141 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 MED18Q9BUE0 208 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 C6orf62Q9GZU0 229 aaPredicted RBP3.78□□□□□ -1.8
SKP1-213ENST00000524288 SPNS1Q9H2V7 528 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 NOX3Q9HBY0 568 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 ISYNA1Q9NPH2 558 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 CLN6Q9NWW5 311 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 NDUFB11Q9NX14 153 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 TAS2R9Q9NYW1 312 aa3.78□□□□□ -1.8
SKP1-213ENST00000524288 PEF1Q9UBV8 284 aaKnown RBP3.78□□□□□ -1.8
SKP1-213ENST00000524288 RBMX2Q9Y388 322 aaKnown RBP3.78□□□□□ -1.8
SKP1-213ENST00000524288 SAMHD1Q9Y3Z3 626 aaKnown RBP3.78□□□□□ -1.8
SKP1-213ENST00000524288 PLXND1Q9Y4D7 1925 aa3.78□□□□□ -1.81
SKP1-213ENST00000524288 IGLV3-16A0A075B6K0 115 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 A0A096LNJ9 63 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 IGHV3-74A0A0B4J1X5 117 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 CXorf51AA0A1B0GTR3 108 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 CENPXA8MT69 81 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 E5RI56 91 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 F5H5T6 163 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 RFXANKO14593 260 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 ANGPTL7O43827 346 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 OR1I1O60431 355 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 GCM2O75603 506 aaPredicted RBP3.77□□□□□ -1.81
SKP1-213ENST00000524288 STK16O75716 305 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 AQP8O94778 261 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 ZNF682O95780 498 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 PDYNP01213 254 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 C1QBP02746 253 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 PIRTP0C851 137 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 ADRB3P13945 408 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 ZNF7P17097 686 aaPredicted RBP3.77□□□□□ -1.81
SKP1-213ENST00000524288 ATF6P18850 670 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 SRMP19623 302 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 CSNK1A1P48729 337 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 AP2S1P53680 142 aaPredicted RBP3.77□□□□□ -1.81
SKP1-213ENST00000524288 CCL23P55773 120 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 AP1S1P61966 158 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 PPP1CBP62140 327 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 ERCC8Q13216 396 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 TSC22D1Q15714 1073 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 C18orf21Q32NC0 220 aaPredicted RBP3.77□□□□□ -1.81
SKP1-213ENST00000524288 FBXO48Q5FWF7 155 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 THEM4Q5T1C6 240 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 C12orf73Q69YU5 71 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 ADNP2Q6IQ32 1131 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 ABHD12BQ7Z5M8 362 aaPredicted RBP3.77□□□□□ -1.81
SKP1-213ENST00000524288 VTCN1Q7Z7D3 282 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 PCP2Q8IVA1 136 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 SLC30A8Q8IWU4 369 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 GDPD1Q8N9F7 314 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 CHST4Q8NCG5 386 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 OR10G2Q8NGC3 310 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 PIH1D2Q8WWB5 315 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 Q96MT0 163 aa3.77□□□□□ -1.81
SKP1-213ENST00000524288 MGLLQ99685 303 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms