RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 OR13A1Q8NGR1 328 aa9.4□□□□□ -0.9
SPARC-206ENST00000524277 RHOXF1Q8NHV9 184 aa9.4□□□□□ -0.9
SPARC-206ENST00000524277 PYDC1Q8WXC3 89 aa9.4□□□□□ -0.9
SPARC-206ENST00000524277 NR1H4Q96RI1 486 aaPredicted RBP9.4□□□□□ -0.9
SPARC-206ENST00000524277 JAM3Q9BX67 310 aa9.4□□□□□ -0.9
SPARC-206ENST00000524277 GON7Q9BXV9 100 aa9.4□□□□□ -0.9
SPARC-206ENST00000524277 PPIL3Q9H2H8 161 aaKnown RBP9.4□□□□□ -0.9
SPARC-206ENST00000524277 RAB9BQ9NP90 201 aa9.4□□□□□ -0.9
SPARC-206ENST00000524277 FAM118AQ9NWS6 357 aa9.4□□□□□ -0.9
SPARC-206ENST00000524277 PAK1IP1Q9NWT1 392 aaPredicted RBP9.4□□□□□ -0.9
SPARC-206ENST00000524277 ERVK13-1Q9NX77 482 aa9.4□□□□□ -0.9
SPARC-206ENST00000524277 ING3Q9NXR8 418 aa9.4□□□□□ -0.9
SPARC-206ENST00000524277 KIF25Q9UIL4 384 aa9.4□□□□□ -0.9
SPARC-206ENST00000524277 PSG11Q9UQ72 335 aa9.4□□□□□ -0.9
SPARC-206ENST00000524277 K7EIL1 84 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 CCRL2O00421 344 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 ZNF780AO75290 641 aaPredicted RBP9.39□□□□□ -0.91
SPARC-206ENST00000524277 IGHG2P01859 326 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 GAPDHP04406 335 aaKnown RBP9.39□□□□□ -0.91
SPARC-206ENST00000524277 SNRNP70P08621 437 aaKnown RBP9.39□□□□□ -0.91
SPARC-206ENST00000524277 GABRB1P18505 474 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 MYCNOSP40205 109 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 RPL23AP62750 156 aaKnown RBP9.39□□□□□ -0.91
SPARC-206ENST00000524277 ZNF816Q0VGE8 651 aaPredicted RBP9.39□□□□□ -0.91
SPARC-206ENST00000524277 EBI3Q14213 229 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 HES1Q14469 280 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 ZIK1Q3SY52 487 aaPredicted RBP9.39□□□□□ -0.91
SPARC-206ENST00000524277 Q3ZCU0 254 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 DEFB121Q5J5C9 76 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 RSBN1Q5VWQ0 802 aaPredicted RBP9.39□□□□□ -0.91
SPARC-206ENST00000524277 RPL22L1Q6P5R6 122 aaKnown RBP9.39□□□□□ -0.91
SPARC-206ENST00000524277 RNF144BQ7Z419 303 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 SATL1Q86VE3 508 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 FOXRED2Q8IWF2 684 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 DRAM1Q8N682 238 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 C5orf56Q8N8D9 126 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 C8orf31Q8N9H6 132 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 OR10X1Q8NGY0 326 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 OR56B4Q8NH76 319 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 GPR148Q8TDV2 347 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 TNFAIP8L1Q8WVP5 186 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 S100A13Q99584 98 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 PDCD1LG2Q9BQ51 273 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 C9orf16Q9BUW7 83 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 METTL9Q9H1A3 318 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 ISG20L2Q9H9L3 353 aaKnown RBP9.39□□□□□ -0.91
SPARC-206ENST00000524277 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.39□□□□□ -0.91
SPARC-206ENST00000524277 IL36GQ9NZH8 169 aa9.39□□□□□ -0.91
SPARC-206ENST00000524277 A0A1W2PPI3 338 aa9.38□□□□□ -0.91
SPARC-206ENST00000524277 SERPINE3A8MV23 424 aa9.38□□□□□ -0.91
SPARC-206ENST00000524277 CSTBP04080 98 aaKnown RBP9.38□□□□□ -0.91
SPARC-206ENST00000524277 THBS3P49746 956 aa9.38□□□□□ -0.91
SPARC-206ENST00000524277 LPCAT4Q643R3 524 aa9.38□□□□□ -0.91
SPARC-206ENST00000524277 SLC35E3Q7Z769 313 aa9.38□□□□□ -0.91
SPARC-206ENST00000524277 MRPL41Q8IXM3 137 aaKnown RBP9.38□□□□□ -0.91
SPARC-206ENST00000524277 CBR4Q8N4T8 237 aa9.38□□□□□ -0.91
SPARC-206ENST00000524277 LINC00311Q8N616 119 aa9.38□□□□□ -0.91
SPARC-206ENST00000524277 ZNF649Q9BS31 505 aa9.38□□□□□ -0.91
SPARC-206ENST00000524277 DPCDQ9BVM2 203 aaPredicted RBP9.38□□□□□ -0.91
SPARC-206ENST00000524277 TMEM138Q9NPI0 162 aa9.38□□□□□ -0.91
SPARC-206ENST00000524277 ST3GAL6Q9Y274 331 aa9.38□□□□□ -0.91
SPARC-206ENST00000524277 LOC100130705A0A1B0GUX0 176 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 TMEM30CPA0ZSE6 113 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 IRGMA1A4Y4 181 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 SH2D7A6NKC9 451 aaPredicted RBP9.37□□□□□ -0.91
SPARC-206ENST00000524277 AP4M1O00189 453 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 GABRPO00591 440 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 HSPB6O14558 160 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 ORC5O43913 435 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 HTR3BO95264 441 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 IGKV1D-33P01593 117 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 IGKV1-33P01594 117 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 IL3RAP26951 378 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 PPP3R1P63098 170 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 GPR176Q14439 515 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 ZSCAN26Q16670 478 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 MPV17LQ2QL34 196 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 TMEM30BQ3MIR4 351 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 TEX38Q6PEX7 206 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 C10orf99Q6UWK7 81 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 TMPRSS11AQ6ZMR5 421 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 OR2W3Q7Z3T1 314 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 ZNF329Q86UD4 541 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 TGIF2LXQ8IUE1 241 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 IZUMO1Q8IYV9 350 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 SUMF2Q8NBJ7 301 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 OR52I1Q8NGK6 324 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 OR2T10Q8NGZ9 312 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 RFESDQ8TAC1 157 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 MRGPRDQ8TDS7 321 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 FAM192AQ9GZU8 254 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 SPACA1Q9HBV2 294 aa9.37□□□□□ -0.91
SPARC-206ENST00000524277 FGF20Q9NP95 211 aaPredicted RBP9.37□□□□□ -0.91
SPARC-206ENST00000524277 IGHV1-3A0A0C4DH29 117 aa9.36□□□□□ -0.91
SPARC-206ENST00000524277 NUDT19A8MXV4 375 aa9.36□□□□□ -0.91
SPARC-206ENST00000524277 E9PI62 339 aa9.36□□□□□ -0.91
SPARC-206ENST00000524277 H3BNX3 289 aa9.36□□□□□ -0.91
SPARC-206ENST00000524277 HSD17B6O14756 317 aa9.36□□□□□ -0.91
SPARC-206ENST00000524277 TXNL1O43396 289 aa9.36□□□□□ -0.91
SPARC-206ENST00000524277 RAMP3O60896 148 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms