RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 UNQ9370/PRO34162Q6UXP9 181 aa2.89□□□□□ -1.95
VPS13B-208ENST00000521037 DPY19L2P2Q6ZN68 376 aa2.89□□□□□ -1.95
VPS13B-208ENST00000521037 EIF3MQ7L2H7 374 aaKnown RBP2.89□□□□□ -1.95
VPS13B-208ENST00000521037 C5orf24Q7Z6I8 188 aa2.89□□□□□ -1.95
VPS13B-208ENST00000521037 RANBP3LQ86VV4 465 aaPredicted RBP2.89□□□□□ -1.95
VPS13B-208ENST00000521037 C11orf53Q8IXP5 236 aa2.89□□□□□ -1.95
VPS13B-208ENST00000521037 DHRSXQ8N5I4 330 aa2.89□□□□□ -1.95
VPS13B-208ENST00000521037 OR4K5Q8NGD3 323 aa2.89□□□□□ -1.95
VPS13B-208ENST00000521037 C12orf43Q96C57 262 aaKnown RBP2.89□□□□□ -1.95
VPS13B-208ENST00000521037 HAVCR1Q96D42 359 aa2.89□□□□□ -1.95
VPS13B-208ENST00000521037 L3HYPDHQ96EM0 354 aa2.89□□□□□ -1.95
VPS13B-208ENST00000521037 TSSK3Q96PN8 268 aa2.89□□□□□ -1.95
VPS13B-208ENST00000521037 PITX2Q99697 317 aa2.89□□□□□ -1.95
VPS13B-208ENST00000521037 NKX3-1Q99801 234 aaPredicted RBP2.89□□□□□ -1.95
VPS13B-208ENST00000521037 TMEM43Q9BTV4 400 aa2.89□□□□□ -1.95
VPS13B-208ENST00000521037 GON7Q9BXV9 100 aa2.89□□□□□ -1.95
VPS13B-208ENST00000521037 WDR55Q9H6Y2 383 aaPredicted RBP2.89□□□□□ -1.95
VPS13B-208ENST00000521037 KAT8Q9H7Z6 458 aaKnown RBP2.89□□□□□ -1.95
VPS13B-208ENST00000521037 VNN3Q9NY84 501 aa2.89□□□□□ -1.95
VPS13B-208ENST00000521037 PIPOXQ9P0Z9 390 aa2.89□□□□□ -1.95
VPS13B-208ENST00000521037 FBXL3Q9UKT7 428 aa2.89□□□□□ -1.95
VPS13B-208ENST00000521037 ERGIC3Q9Y282 383 aa2.89□□□□□ -1.95
VPS13B-208ENST00000521037 STARD10Q9Y365 291 aa2.89□□□□□ -1.95
VPS13B-208ENST00000521037 POLR3HQ9Y535 204 aaPredicted RBP2.89□□□□□ -1.95
VPS13B-208ENST00000521037 TIMM22Q9Y584 194 aa2.89□□□□□ -1.95
VPS13B-208ENST00000521037 HSPE1-MOB4S4R3N1 261 aa2.89□□□□□ -1.95
VPS13B-208ENST00000521037 A0A075B6Q4 140 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 TRAV26-1A0A087WT03 109 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 A0A087WZ39 114 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 PLSCR5A0PG75 271 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 PRORSD1PA6NEY8 169 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 FBLL1A6NHQ2 334 aaKnown RBP2.88□□□□□ -1.95
VPS13B-208ENST00000521037 LRRC30A6NM36 301 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 IFITM10A6NMD0 228 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 HNRNPCL2B2RXH8 293 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 SEC14L6B5MCN3 397 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 LRRN3E7EW58 273 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 H3BMQ9 156 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 FBP2O00757 339 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 ARPC3O15145 178 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 SLC22A1O15245 554 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 SCN2BO60939 215 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 SULT1C4O75897 302 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 BGLAPP02818 100 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 TFF1P04155 84 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 FCER2P06734 321 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 PGA4P0DJD7 388 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 PGA3P0DJD8 388 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 LAMP1P11279 417 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 ANXA8P13928 327 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 GFAPP14136 432 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 ZNF43P17038 809 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 ZNF32P17041 273 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 SDC1P18827 310 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 STOMP27105 288 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 GTF2E2P29084 291 aaKnown RBP2.88□□□□□ -1.95
VPS13B-208ENST00000521037 IL12AP29459 219 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 GRPRP30550 384 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 CRATP43155 626 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 VDAC2P45880 294 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-208ENST00000521037 TGM4P49221 684 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 CCT3P49368 545 aaKnown RBP2.88□□□□□ -1.95
VPS13B-208ENST00000521037 RGS6P49758 472 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 FHITP49789 147 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 SLC7A2P52569 658 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 CXCR4P61073 352 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 CSNK2BP67870 215 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 ADARB1P78563 741 aaKnown RBP2.88□□□□□ -1.95
VPS13B-208ENST00000521037 RIPPLY1Q0D2K3 151 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 KIAA0141Q14154 515 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-208ENST00000521037 OXA1LQ15070 435 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 TBC1D28Q2M2D7 210 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 RSPO1Q2MKA7 263 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-208ENST00000521037 TRIM16LQ309B1 348 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 C9orf66Q5T8R8 295 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 ANXA8L1Q5VT79 327 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 RNLSQ5VYX0 342 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 TEX36Q5VZQ5 186 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 Q6ZRG5 221 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 LINC00336Q6ZUF6 198 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 CENPSQ8N2Z9 138 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 CBR4Q8N4T8 237 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 CCNYL1Q8N7R7 359 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 OR52H1Q8NGJ2 320 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 OR13F1Q8NGS4 319 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 OR2T11Q8NH01 316 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 CMBLQ96DG6 245 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 SEH1LQ96EE3 360 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 AKR1E2Q96JD6 320 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 CCDC115Q96NT0 180 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 TECTBQ96PL2 329 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 NEDD4LQ96PU5 975 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 SLC29A1Q99808 456 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 CIB1Q99828 191 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 SH3GL1Q99961 368 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 ST6GALNAC5Q9BVH7 336 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 MROQ9BYG7 248 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 ULBP2Q9BZM5 246 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 MAGT1Q9H0U3 335 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 SLC38A1Q9H2H9 487 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms