RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 SCGB1C1Q8TD33 95 aa2.46□□□□□ -2.02
SREK1-208ENST00000520580 PRSS27Q9BQR3 290 aa2.46□□□□□ -2.02
SREK1-208ENST00000520580 RTBDNQ9BSG5 229 aaPredicted RBP2.46□□□□□ -2.02
SREK1-208ENST00000520580 IFI27L2Q9H2X8 130 aa2.46□□□□□ -2.02
SREK1-208ENST00000520580 GLS2Q9UI32 602 aa2.46□□□□□ -2.02
SREK1-208ENST00000520580 ZNF223Q9UK11 482 aaPredicted RBP2.46□□□□□ -2.02
SREK1-208ENST00000520580 LTBP1Q14766 1721 aa2.46□□□□□ -2.02
SREK1-208ENST00000520580 UHRF1BP1Q6BDS2 1440 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 TRBV6-6A0A0A6YYG2 114 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 IGKV1-39P01597 117 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 IGKV1D-39P04432 117 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 ZNF19P17023 458 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 GNG10P50151 68 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 TAS2R43P59537 309 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 KRTAP10-11P60412 298 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 ERVS71-1P61550 626 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 RANP62826 216 aaKnown RBP2.45□□□□□ -2.02
SREK1-208ENST00000520580 SLC35A2P78381 396 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 GTF2BQ00403 316 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 TMEM176BQ3YBM2 270 aaPredicted RBP2.45□□□□□ -2.02
SREK1-208ENST00000520580 RNF212Q495C1 297 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 RNASE13Q5GAN3 156 aaKnown RBP2.45□□□□□ -2.02
SREK1-208ENST00000520580 CLLU1OSQ5K130 101 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 FAM222AQ5U5X8 452 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 SYPL2Q5VXT5 272 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 STX12Q86Y82 276 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 FAM57AQ8TBR7 257 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 YPEL4Q96NS1 127 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 SELENOSQ9BQE4 189 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 EBPLQ9BY08 206 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 PECRQ9BY49 303 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 VCX3BQ9H321 246 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 SLC2A9Q9NRM0 540 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 SLC22A13Q9Y226 551 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 ARHGAP23Q9P227 1491 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 A0A1B0GUA9 196 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 TMEM72A0PK05 275 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 KLLNB2CW77 178 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 LGALS9O00182 355 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 ACOX3O15254 700 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 SOCS1O15524 211 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 SRSF10O75494 262 aaKnown RBP2.45□□□□□ -2.02
SREK1-208ENST00000520580 CNMDO75829 334 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 MRPL3P09001 348 aaKnown RBP2.45□□□□□ -2.02
SREK1-208ENST00000520580 ZNF823P16415 610 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 CFL1P23528 166 aaKnown RBP2.45□□□□□ -2.02
SREK1-208ENST00000520580 AGTR1P30556 359 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 OMPP47874 163 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 PFN3P60673 137 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 TAF1AQ15573 450 aaPredicted RBP2.45□□□□□ -2.02
SREK1-208ENST00000520580 SLC25A45Q8N413 288 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 SLC25A29Q8N8R3 303 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 C15orf56Q8N910 161 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 OR10D3Q8NH80 312 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 EEF1AKMT1Q8WVE0 214 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 OR51B6Q9H340 312 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.45□□□□□ -2.02
SREK1-208ENST00000520580 GLI2P10070 1586 aa2.45□□□□□ -2.02
SREK1-208ENST00000520580 POLA1P09884 1462 aaPredicted RBP2.45□□□□□ -2.02
SREK1-208ENST00000520580 C9orf84Q5VXU9 1444 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 CLUHO75153 1309 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 CENPVL3A0A0U1RRI6 287 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 NKX2-6A6NCS4 301 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 K7EQS6 105 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 DCTN3O75935 186 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 HLA-DRAP01903 254 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 LINC00614P0C842 121 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 CCR7P32248 378 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 GDI2P50395 445 aaKnown RBP2.44□□□□□ -2.02
SREK1-208ENST00000520580 SERPINB9P50453 376 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 HPCAP84074 193 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 DEFA6Q01524 100 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 LUZP6Q538Z0 58 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 YIF1BQ5BJH7 314 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 OR10K2Q6IF99 312 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 NTM-AS1Q6ZSK4 140 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 TMEM161BQ8NDZ6 487 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 OR5H2Q8NGV7 314 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 MFSD8Q8NHS3 518 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 CIRBP-AS1Q8TBR5 109 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 SLC35E1Q96K37 410 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 C11orf49Q9H6J7 331 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 HMG20AQ9NP66 347 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 DKKL1Q9UK85 242 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 HDGFL3Q9Y3E1 203 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 SLC22A7Q9Y694 548 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 CHD2O14647 1828 aaKnown RBP2.44□□□□□ -2.02
SREK1-208ENST00000520580 DNMT1P26358 1616 aaKnown RBP2.44□□□□□ -2.02
SREK1-208ENST00000520580 IGHV3-49A0A0A0MS15 119 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 IGHV2-26A0A0B4J1V2 119 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 IGKV1-6A0A0C4DH72 117 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 GAS8-AS1O95177 125 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 SLC6A1P30531 599 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 HSPA13P48723 471 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 SRSF6Q13247 344 aaKnown RBP2.44□□□□□ -2.02
SREK1-208ENST00000520580 SKP2Q13309 424 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 SPIN3Q5JUX0 258 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 HIST2H3PS2Q5TEC6 136 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 CYB5R2Q6BCY4 276 aa2.44□□□□□ -2.02
SREK1-208ENST00000520580 CCDC121Q6ZUS5 278 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms