RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 MARCH3Q86UD3 253 aa2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 RPRMLQ8N4K4 120 aa2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 ANP32BQ92688 251 aaKnown RBP2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 ZNF426Q9BUY5 554 aa2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 TXNIPQ9H3M7 391 aa2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 METTL17Q9H7H0 456 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 VSIRQ9H7M9 311 aa2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 IMP3Q9NV31 184 aaKnown RBP2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 DMAC2Q9NW81 257 aa2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 PSMD13Q9UNM6 376 aa2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 TRAPPC1Q9Y5R8 145 aa2.92□□□□□ -1.94
HMGB1P46-201ENST00000520062 FTCDNL1E5RQL4 147 aa2.91□□□□□ -1.94
HMGB1P46-201ENST00000520062 HSPA13P48723 471 aa2.91□□□□□ -1.94
HMGB1P46-201ENST00000520062 FLI1Q01543 452 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P46-201ENST00000520062 BIKQ13323 160 aa2.91□□□□□ -1.94
HMGB1P46-201ENST00000520062 ZNF235Q14590 738 aa2.91□□□□□ -1.94
HMGB1P46-201ENST00000520062 CLEC12BQ2HXU8 276 aa2.91□□□□□ -1.94
HMGB1P46-201ENST00000520062 ZFP82Q8N141 532 aa2.91□□□□□ -1.94
HMGB1P46-201ENST00000520062 C3orf22Q8N5N4 141 aa2.91□□□□□ -1.94
HMGB1P46-201ENST00000520062 ZNF680Q8NEM1 530 aa2.91□□□□□ -1.94
HMGB1P46-201ENST00000520062 OR52E4Q8NGH9 312 aa2.91□□□□□ -1.94
HMGB1P46-201ENST00000520062 RBPMSQ93062 196 aaKnown RBP2.91□□□□□ -1.94
HMGB1P46-201ENST00000520062 DCUN1D5Q9BTE7 237 aa2.91□□□□□ -1.94
HMGB1P46-201ENST00000520062 UPF3BQ9BZI7 483 aaKnown RBP2.91□□□□□ -1.94
HMGB1P46-201ENST00000520062 FBXL15Q9H469 300 aa2.91□□□□□ -1.94
HMGB1P46-201ENST00000520062 TRIM45Q9H8W5 580 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P46-201ENST00000520062 MYO15BQ96JP2 1530 aa2.91□□□□□ -1.94
HMGB1P46-201ENST00000520062 ADGRL1O94910 1474 aa2.9□□□□□ -1.94
HMGB1P46-201ENST00000520062 KLRC4-KLRK1H3BQV0 150 aa2.9□□□□□ -1.95
HMGB1P46-201ENST00000520062 ZNF3P17036 446 aa2.9□□□□□ -1.95
HMGB1P46-201ENST00000520062 F8A1P23610 371 aa2.9□□□□□ -1.95
HMGB1P46-201ENST00000520062 ANP32AP39687 249 aaKnown RBP2.9□□□□□ -1.95
HMGB1P46-201ENST00000520062 ACTR1BP42025 376 aa2.9□□□□□ -1.95
HMGB1P46-201ENST00000520062 RPL14P50914 215 aaKnown RBP2.9□□□□□ -1.95
HMGB1P46-201ENST00000520062 EMP2P54851 167 aa2.9□□□□□ -1.95
HMGB1P46-201ENST00000520062 GTF2BQ00403 316 aa2.9□□□□□ -1.95
HMGB1P46-201ENST00000520062 MMDQ15546 238 aa2.9□□□□□ -1.95
HMGB1P46-201ENST00000520062 TMEM136Q6ZRR5 245 aa2.9□□□□□ -1.95
HMGB1P46-201ENST00000520062 LYPD1Q8N2G4 141 aa2.9□□□□□ -1.95
HMGB1P46-201ENST00000520062 OR4C13Q8NGP0 309 aa2.9□□□□□ -1.95
HMGB1P46-201ENST00000520062 STOML3Q8TAV4 291 aa2.9□□□□□ -1.95
HMGB1P46-201ENST00000520062 SHANK2-AS3Q9BTD1 123 aa2.9□□□□□ -1.95
HMGB1P46-201ENST00000520062 SLC19A3Q9BZV2 496 aa2.9□□□□□ -1.95
HMGB1P46-201ENST00000520062 KIF26AQ9ULI4 1882 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P46-201ENST00000520062 LOXHD1Q8IVV2 1947 aa2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 BRWD3Q6RI45 1802 aa2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 IGLV3-19P01714 112 aa2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 INAFM2P0DMQ5 153 aa2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 INPP1P49441 399 aa2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 PSMD7P51665 324 aa2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 MP68P56378 58 aa2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 RPS11P62280 158 aaKnown RBP eCLIP2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 FMODQ06828 376 aa2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 SKP2Q13309 424 aa2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 LDLRAD2Q5SZI1 272 aa2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 ELP2Q6IA86 826 aa2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 TTC33Q6PID6 262 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 C1orf64Q8NEQ6 169 aa2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 SMIM12Q96EX1 92 aa2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 REEP6Q96HR9 211 aa2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 GPR22Q99680 433 aa2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 CHST5Q9GZS9 411 aa2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 SPANXB1Q9NS25 103 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 BTRCQ9Y297 605 aa2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 BAZ1BQ9UIG0 1483 aaKnown RBP2.89□□□□□ -1.95
HMGB1P46-201ENST00000520062 IGKV1OR2-108A0A075B7D4 117 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 A0A0A6YYH2 397 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 A6NJ64 397 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 SOX14O95416 240 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 PDYNP01213 254 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 HIST1H1CP16403 213 aaKnown RBP2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 MED21Q13503 144 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 CASP8Q14790 479 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 ZCWPW2Q504Y3 356 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 DRAM2Q6UX65 266 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 SPNS3Q6ZMD2 512 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 FAM19A3Q7Z5A8 133 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 PLCZ1Q86YW0 608 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 FUNDC1Q8IVP5 155 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 BLIDQ8IZY5 108 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 OR1P1Q8NH06 330 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 CMBLQ96DG6 245 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 RBP7Q96R05 134 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 TAS2R1Q9NYW7 299 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 NAGKQ9UJ70 344 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 DYSFO75923 2080 aa2.88□□□□□ -1.95
HMGB1P46-201ENST00000520062 TICRRQ7Z2Z1 1910 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 ZNF729A6NN14 1252 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 H3BQ85 93 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 CD34P28906 385 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 RAB2AP61019 212 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 LRRC26Q2I0M4 334 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 LAIR2Q6ISS4 152 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 CPNE9Q8IYJ1 553 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 OR11L1Q8NGX0 322 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 DNAJB3Q8WWF6 145 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 MAL2Q969L2 176 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 OR2V2Q96R30 315 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 PLA2G12AQ9BZM1 189 aa2.87□□□□□ -1.95
HMGB1P46-201ENST00000520062 UBQLN4Q9NRR5 601 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms