RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 RSBN1Q5VWQ0 802 aaPredicted RBP20.21■□□□□ 0.83
VEGFA-220ENST00000519767 TTC23Q5W5X9 447 aa20.21■□□□□ 0.83
VEGFA-220ENST00000519767 XAF1Q6GPH4 301 aa20.21■□□□□ 0.83
VEGFA-220ENST00000519767 OR10K1Q8NGX5 313 aa20.21■□□□□ 0.83
VEGFA-220ENST00000519767 C8orf4Q9NR00 106 aa20.21■□□□□ 0.83
VEGFA-220ENST00000519767 CHCHD3Q9NX63 227 aaKnown RBP20.21■□□□□ 0.83
VEGFA-220ENST00000519767 ST3GAL6Q9Y274 331 aa20.21■□□□□ 0.83
VEGFA-220ENST00000519767 FAM90A18PA6NE21 464 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 FAM90A16PA6NEW6 464 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 FAM90A20PA6NIJ5 464 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 FAM90A9PA6NNJ1 464 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 FAM90A12PA8MX19 464 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 FAM90A5PA8MXJ8 464 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 ZNF780AO75290 641 aaPredicted RBP20.2■□□□□ 0.82
VEGFA-220ENST00000519767 CSTBP04080 98 aaKnown RBP20.2■□□□□ 0.82
VEGFA-220ENST00000519767 LPLP06858 475 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 FAM90A15PP0C7V4 464 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 FAM90A13PP0C7W8 464 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 FAM90A14PP0C7W9 464 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 FAM90A24PP0C7X0 464 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 MADCAM1Q13477 382 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 PIGYQ3MUY2 71 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 FBLN7Q53RD9 439 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 OR2G6Q5TZ20 316 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 LINC00596Q86U02 117 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 OSR2Q8N2R0 312 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 WFDC9Q8NEX5 89 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 SMIM19Q96E16 107 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 DPCDQ9BVM2 203 aaPredicted RBP20.2■□□□□ 0.82
VEGFA-220ENST00000519767 PSG11Q9UQ72 335 aa20.2■□□□□ 0.82
VEGFA-220ENST00000519767 CDRT1O95170 752 aa20.19■□□□□ 0.82
VEGFA-220ENST00000519767 AMY1AP04745 511 aa20.19■□□□□ 0.82
VEGFA-220ENST00000519767 AMY2AP04746 511 aa20.19■□□□□ 0.82
VEGFA-220ENST00000519767 BDKRB2P30411 391 aa20.19■□□□□ 0.82
VEGFA-220ENST00000519767 SUMF2Q8NBJ7 301 aa20.19■□□□□ 0.82
VEGFA-220ENST00000519767 SETD9Q8NE22 299 aa20.19■□□□□ 0.82
VEGFA-220ENST00000519767 OR52N1Q8NH53 320 aa20.19■□□□□ 0.82
VEGFA-220ENST00000519767 PLPPR1Q8TBJ4 325 aa20.19■□□□□ 0.82
VEGFA-220ENST00000519767 TOMM40LQ969M1 308 aa20.19■□□□□ 0.82
VEGFA-220ENST00000519767 TSSC4Q9Y5U2 329 aaPredicted RBP20.19■□□□□ 0.82
VEGFA-220ENST00000519767 TCRBV4S1A1TA0A5B7 111 aa20.18■□□□□ 0.82
VEGFA-220ENST00000519767 GPX5O75715 221 aa20.18■□□□□ 0.82
VEGFA-220ENST00000519767 OXLD1Q5BKU9 147 aa20.18■□□□□ 0.82
VEGFA-220ENST00000519767 UTF1Q5T230 341 aa20.18■□□□□ 0.82
VEGFA-220ENST00000519767 DDI2Q5TDH0 399 aa20.18■□□□□ 0.82
VEGFA-220ENST00000519767 RFESDQ8TAC1 157 aa20.18■□□□□ 0.82
VEGFA-220ENST00000519767 MRGPRDQ8TDS7 321 aa20.18■□□□□ 0.82
VEGFA-220ENST00000519767 GHSRQ92847 366 aa20.18■□□□□ 0.82
VEGFA-220ENST00000519767 TMEM80Q96HE8 168 aa20.18■□□□□ 0.82
VEGFA-220ENST00000519767 CKLFQ9UBR5 152 aa20.18■□□□□ 0.82
VEGFA-220ENST00000519767 SIRT4Q9Y6E7 314 aaPredicted RBP20.18■□□□□ 0.82
VEGFA-220ENST00000519767 OR7C1O76099 320 aaPredicted RBP20.17■□□□□ 0.82
VEGFA-220ENST00000519767 RAB7AP51149 207 aa20.17■□□□□ 0.82
VEGFA-220ENST00000519767 RBM11P57052 281 aaKnown RBP20.17■□□□□ 0.82
VEGFA-220ENST00000519767 RIPK1Q13546 671 aa20.17■□□□□ 0.82
VEGFA-220ENST00000519767 GPR176Q14439 515 aa20.17■□□□□ 0.82
VEGFA-220ENST00000519767 PACRGLQ8N7B6 248 aa20.17■□□□□ 0.82
VEGFA-220ENST00000519767 OR4X2Q8NGF9 303 aa20.17■□□□□ 0.82
VEGFA-220ENST00000519767 MPV17LQ2QL34 196 aa20.16■□□□□ 0.82
VEGFA-220ENST00000519767 YIF1BQ5BJH7 314 aa20.16■□□□□ 0.82
VEGFA-220ENST00000519767 TCTEX1D4Q5JR98 221 aa20.16■□□□□ 0.82
VEGFA-220ENST00000519767 DMKNQ6E0U4 476 aaPredicted RBP20.16■□□□□ 0.82
VEGFA-220ENST00000519767 OR8H3Q8N146 312 aa20.16■□□□□ 0.82
VEGFA-220ENST00000519767 CYGBQ8WWM9 190 aa20.16■□□□□ 0.82
VEGFA-220ENST00000519767 SGCDQ92629 289 aa20.16■□□□□ 0.82
VEGFA-220ENST00000519767 MOB4Q9Y3A3 225 aa20.16■□□□□ 0.82
VEGFA-220ENST00000519767 HSPE1-MOB4S4R3N1 261 aa20.16■□□□□ 0.82
VEGFA-220ENST00000519767 TRBV5-5A0A0J9YX44 114 aa20.15■□□□□ 0.82
VEGFA-220ENST00000519767 A0A1W2PRX2 142 aa20.15■□□□□ 0.82
VEGFA-220ENST00000519767 TMEM30CPA0ZSE6 113 aa20.15■□□□□ 0.82
VEGFA-220ENST00000519767 IGHV3-7P01780 117 aa20.15■□□□□ 0.82
VEGFA-220ENST00000519767 PF4V1P10720 104 aa20.15■□□□□ 0.82
VEGFA-220ENST00000519767 GTF2F2P13984 249 aa20.15■□□□□ 0.82
VEGFA-220ENST00000519767 IGFBP3P17936 291 aaPredicted RBP20.15■□□□□ 0.82
VEGFA-220ENST00000519767 CD33P20138 364 aa20.15■□□□□ 0.82
VEGFA-220ENST00000519767 Q499Y3 187 aa20.15■□□□□ 0.82
VEGFA-220ENST00000519767 C9orf152Q5JTZ5 239 aa20.15■□□□□ 0.82
VEGFA-220ENST00000519767 DHRSXQ8N5I4 330 aa20.15■□□□□ 0.82
VEGFA-220ENST00000519767 OR52M1Q8NGK5 317 aa20.15■□□□□ 0.82
VEGFA-220ENST00000519767 OR10X1Q8NGY0 326 aa20.15■□□□□ 0.82
VEGFA-220ENST00000519767 LEAP2Q969E1 77 aa20.15■□□□□ 0.82
VEGFA-220ENST00000519767 NECAP2Q9NVZ3 263 aa20.15■□□□□ 0.82
VEGFA-220ENST00000519767 CLEC2DQ9UHP7 191 aa20.15■□□□□ 0.82
VEGFA-220ENST00000519767 GEMIN2O14893 280 aaKnown RBP20.14■□□□□ 0.81
VEGFA-220ENST00000519767 CLIC3O95833 236 aa20.14■□□□□ 0.81
VEGFA-220ENST00000519767 LTC4SQ16873 150 aa20.14■□□□□ 0.81
VEGFA-220ENST00000519767 DRAM1Q8N682 238 aa20.14■□□□□ 0.81
VEGFA-220ENST00000519767 OR56B4Q8NH76 319 aa20.14■□□□□ 0.81
VEGFA-220ENST00000519767 MYDGFQ969H8 173 aa20.14■□□□□ 0.81
VEGFA-220ENST00000519767 ZNF184Q99676 751 aaPredicted RBP20.14■□□□□ 0.81
VEGFA-220ENST00000519767 SNRNP70P08621 437 aaKnown RBP20.13■□□□□ 0.81
VEGFA-220ENST00000519767 SSTR5P35346 364 aa20.13■□□□□ 0.81
VEGFA-220ENST00000519767 LRRC36Q1X8D7 754 aa20.13■□□□□ 0.81
VEGFA-220ENST00000519767 ATAD3CQ5T2N8 411 aa20.13■□□□□ 0.81
VEGFA-220ENST00000519767 CDH26Q8IXH8 852 aa20.13■□□□□ 0.81
VEGFA-220ENST00000519767 MRPS24Q96EL2 167 aaKnown RBP20.13■□□□□ 0.81
VEGFA-220ENST00000519767 SPACA1Q9HBV2 294 aa20.13■□□□□ 0.81
VEGFA-220ENST00000519767 A0A1W2PPI3 338 aa20.12■□□□□ 0.81
VEGFA-220ENST00000519767 FGF16O43320 207 aa20.12■□□□□ 0.81
VEGFA-220ENST00000519767 ORC5O43913 435 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms