RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 ULBP1Q9BZM6 244 aa2.22□□□□□ -2.05
PTPN12-213ENST00000519553 GOLPH3Q9H4A6 298 aa2.22□□□□□ -2.05
PTPN12-213ENST00000519553 VWDEQ8N2E2 1590 aa2.22□□□□□ -2.05
PTPN12-213ENST00000519553 PGPA6NDG6 321 aa2.21□□□□□ -2.06
PTPN12-213ENST00000519553 RNASEK-C17orf49H0YIS7 233 aa2.21□□□□□ -2.06
PTPN12-213ENST00000519553 H3BP45 60 aa2.21□□□□□ -2.06
PTPN12-213ENST00000519553 NIPSNAP2O75323 286 aa2.21□□□□□ -2.06
PTPN12-213ENST00000519553 FADS2O95864 444 aaKnown RBP2.21□□□□□ -2.06
PTPN12-213ENST00000519553 S100A6P06703 90 aa2.21□□□□□ -2.06
PTPN12-213ENST00000519553 NQO2P16083 231 aa2.21□□□□□ -2.06
PTPN12-213ENST00000519553 CRATP43155 626 aa2.21□□□□□ -2.06
PTPN12-213ENST00000519553 PLTPP55058 493 aa2.21□□□□□ -2.06
PTPN12-213ENST00000519553 TPM4P67936 248 aa2.21□□□□□ -2.06
PTPN12-213ENST00000519553 MSRB3Q8IXL7 192 aa2.21□□□□□ -2.06
PTPN12-213ENST00000519553 OR7G1Q8NGA0 311 aa2.21□□□□□ -2.06
PTPN12-213ENST00000519553 OR6K2Q8NGY2 324 aa2.21□□□□□ -2.06
PTPN12-213ENST00000519553 LGALS14Q8TCE9 139 aa2.21□□□□□ -2.06
PTPN12-213ENST00000519553 SLC25A31Q9H0C2 315 aa2.21□□□□□ -2.06
PTPN12-213ENST00000519553 MRPL16Q9NX20 251 aaKnown RBP2.21□□□□□ -2.06
PTPN12-213ENST00000519553 ENPP5Q9UJA9 477 aa2.21□□□□□ -2.06
PTPN12-213ENST00000519553 POFUT2Q9Y2G5 429 aa2.21□□□□□ -2.06
PTPN12-213ENST00000519553 MYO3BQ8WXR4 1341 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 TRBV24-1A0A075B6N3 115 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 TRAV8-3A0A0A6YYJ7 113 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 A0A1B0GTI1 187 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 OR5H14A6NHG9 310 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 M0QXV9 152 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 ENSAO43768 121 aaKnown RBP2.2□□□□□ -2.06
PTPN12-213ENST00000519553 CALUO43852 315 aaPredicted RBP2.2□□□□□ -2.06
PTPN12-213ENST00000519553 GPR75O95800 540 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 TPM3P06753 285 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 RAB38P57729 211 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 STX4Q12846 297 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 STX3Q13277 289 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 SLAMF1Q13291 335 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 SPICQ8N5J4 248 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 ZIC4Q8N9L1 334 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 LMX1AQ8TE12 382 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 DDI1Q8WTU0 396 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 TMEM239Q8WW34 195 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 ZNF396Q96N95 335 aaPredicted RBP2.2□□□□□ -2.06
PTPN12-213ENST00000519553 BBS2Q9BXC9 721 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 HDHD2Q9H0R4 259 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 RMND1Q9NWS8 449 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 EURLQ9NYK6 297 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 ATP6V1DQ9Y5K8 247 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 OTOGLQ3ZCN5 2332 aa2.2□□□□□ -2.06
PTPN12-213ENST00000519553 COL5A3P25940 1745 aaPredicted RBP2.2□□□□□ -2.06
PTPN12-213ENST00000519553 TRPC5OSA6NMA1 111 aa2.19□□□□□ -2.06
PTPN12-213ENST00000519553 TCF21O43680 179 aa2.19□□□□□ -2.06
PTPN12-213ENST00000519553 NDUFS6O75380 124 aaKnown RBP2.19□□□□□ -2.06
PTPN12-213ENST00000519553 POP7O75817 140 aaKnown RBP2.19□□□□□ -2.06
PTPN12-213ENST00000519553 CA2P00918 260 aa2.19□□□□□ -2.06
PTPN12-213ENST00000519553 IGKV5-2P06315 115 aa2.19□□□□□ -2.06
PTPN12-213ENST00000519553 PSMB6P28072 239 aa2.19□□□□□ -2.06
PTPN12-213ENST00000519553 S100A2P29034 98 aa2.19□□□□□ -2.06
PTPN12-213ENST00000519553 TTPAP49638 278 aa2.19□□□□□ -2.06
PTPN12-213ENST00000519553 CTAG1AP78358 180 aa2.19□□□□□ -2.06
PTPN12-213ENST00000519553 C2orf80Q0P641 193 aa2.19□□□□□ -2.06
PTPN12-213ENST00000519553 TNXAQ16473 311 aa2.19□□□□□ -2.06
PTPN12-213ENST00000519553 PYCR3Q53H96 274 aa2.19□□□□□ -2.06
PTPN12-213ENST00000519553 NXNL2Q5VZ03 156 aa2.19□□□□□ -2.06
PTPN12-213ENST00000519553 ELP2Q6IA86 826 aa2.19□□□□□ -2.06
PTPN12-213ENST00000519553 NOXRED1Q6NXP6 359 aa2.19□□□□□ -2.06
PTPN12-213ENST00000519553 CDKL2Q92772 493 aa2.19□□□□□ -2.06
PTPN12-213ENST00000519553 CMBLQ96DG6 245 aa2.19□□□□□ -2.06
PTPN12-213ENST00000519553 PAIP2Q9BPZ3 127 aaKnown RBP2.19□□□□□ -2.06
PTPN12-213ENST00000519553 VCX3AQ9NNX9 186 aa2.19□□□□□ -2.06
PTPN12-213ENST00000519553 MS4A12Q9NXJ0 267 aa2.19□□□□□ -2.06
PTPN12-213ENST00000519553 MRM2Q9UI43 246 aaKnown RBP2.19□□□□□ -2.06
PTPN12-213ENST00000519553 V9GYY5 206 aaPredicted RBP2.19□□□□□ -2.06
PTPN12-213ENST00000519553 SORL1Q92673 2214 aa2.19□□□□□ -2.06
PTPN12-213ENST00000519553 USP42Q9H9J4 1324 aaKnown RBP2.18□□□□□ -2.06
PTPN12-213ENST00000519553 ATRNO75882 1429 aa2.18□□□□□ -2.06
PTPN12-213ENST00000519553 F8VP50 259 aa2.18□□□□□ -2.06
PTPN12-213ENST00000519553 OVOL1O14753 267 aa2.18□□□□□ -2.06
PTPN12-213ENST00000519553 SH2D1AO60880 128 aa2.18□□□□□ -2.06
PTPN12-213ENST00000519553 BRI3O95415 125 aa2.18□□□□□ -2.06
PTPN12-213ENST00000519553 DEKP35659 375 aaKnown RBP2.18□□□□□ -2.06
PTPN12-213ENST00000519553 FOXF1Q12946 379 aa2.18□□□□□ -2.06
PTPN12-213ENST00000519553 CST6Q15828 149 aa2.18□□□□□ -2.06
PTPN12-213ENST00000519553 GOLGA7BQ2TAP0 167 aa2.18□□□□□ -2.06
PTPN12-213ENST00000519553 KRTAP13-4Q3LI77 160 aa2.18□□□□□ -2.06
PTPN12-213ENST00000519553 ZCWPW2Q504Y3 356 aa2.18□□□□□ -2.06
PTPN12-213ENST00000519553 PCOTHQ58A44 107 aa2.18□□□□□ -2.06
PTPN12-213ENST00000519553 SELENOHQ8IZQ5 122 aaKnown RBP2.18□□□□□ -2.06
PTPN12-213ENST00000519553 ZNF567Q8N184 647 aa2.18□□□□□ -2.06
PTPN12-213ENST00000519553 GTF2H4Q92759 462 aa2.18□□□□□ -2.06
PTPN12-213ENST00000519553 DIABLOQ9NR28 239 aa2.18□□□□□ -2.06
PTPN12-213ENST00000519553 UBAP1Q9NZ09 502 aa2.18□□□□□ -2.06
PTPN12-213ENST00000519553 CLEC2DQ9UHP7 191 aa2.18□□□□□ -2.06
PTPN12-213ENST00000519553 COL11A1P12107 1806 aaPredicted RBP2.18□□□□□ -2.06
PTPN12-213ENST00000519553 A0A1B0GW15 77 aa2.17□□□□□ -2.06
PTPN12-213ENST00000519553 TMEM213A2RRL7 107 aa2.17□□□□□ -2.06
PTPN12-213ENST00000519553 MKRN2OSH3BPM6 223 aa2.17□□□□□ -2.06
PTPN12-213ENST00000519553 ITGB1BP1O14713 200 aa2.17□□□□□ -2.06
PTPN12-213ENST00000519553 LECT2O14960 151 aa2.17□□□□□ -2.06
PTPN12-213ENST00000519553 GZMHP20718 246 aa2.17□□□□□ -2.06
PTPN12-213ENST00000519553 DNASE1L1P49184 302 aa2.17□□□□□ -2.06
PTPN12-213ENST00000519553 OR2B6P58173 313 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms