RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362		K7EM74	188 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	GPR31	O00270	319 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	SLC33A1	O00400	549 aa	Predicted RBP	10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	OR2H2	O95918	312 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	DUX4L2	P0CJ85	424 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	DUX4L3	P0CJ86	424 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	DUX4L4	P0CJ87	422 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	DUX4L5	P0CJ88	424 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	DUX4L6	P0CJ89	424 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	DUX4L7	P0CJ90	424 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	RCC1	P18754	421 aa	Predicted RBP	10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	ZP3	P21754	424 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	SPIN3	Q5JUX0	258 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	BEND4	Q6ZU67	534 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	BHLHA15	Q7RTS1	189 aa	Predicted RBP	10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	TBC1D26	Q86UD7	250 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	SECTM1	Q8WVN6	248 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	TMEM56	Q96MV1	263 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	BCL2L14	Q9BZR8	327 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	TMEM100	Q9NV29	134 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	DUX4	Q9UBX2	424 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	TINAG	Q9UJW2	476 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	TMED3	Q9Y3Q3	217 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	FAM215A	Q9Y5M1	114 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	TMEM56-RWDD3	S4R434	201 aa		10.49	□□□□□ -0.73
SPIDR-210	ENST00000519362	URB1	O60287	2271 aa	Known RBP	10.48	□□□□□ -0.73
SPIDR-210	ENST00000519362	IGHV1-18	A0A0C4DH31	117 aa		10.48	□□□□□ -0.73
SPIDR-210	ENST00000519362	NPIPB11	E5RHQ5	1161 aa		10.48	□□□□□ -0.73
SPIDR-210	ENST00000519362	TAAR5	O14804	337 aa		10.48	□□□□□ -0.73
SPIDR-210	ENST00000519362	FGF16	O43320	207 aa		10.48	□□□□□ -0.73
SPIDR-210	ENST00000519362	MBP	P02686	304 aa	Predicted RBP	10.48	□□□□□ -0.73
SPIDR-210	ENST00000519362	SRPX	P78539	464 aa		10.48	□□□□□ -0.73
SPIDR-210	ENST00000519362	SMCO1	Q147U7	214 aa		10.48	□□□□□ -0.73
SPIDR-210	ENST00000519362	ZNF324B	Q6AW86	544 aa	Predicted RBP	10.48	□□□□□ -0.73
SPIDR-210	ENST00000519362	ZNF497	Q6ZNH5	498 aa		10.48	□□□□□ -0.73
SPIDR-210	ENST00000519362	ASCL5	Q7RTU5	278 aa		10.48	□□□□□ -0.73
SPIDR-210	ENST00000519362	FOXRED2	Q8IWF2	684 aa		10.48	□□□□□ -0.73
SPIDR-210	ENST00000519362	C11orf53	Q8IXP5	236 aa		10.48	□□□□□ -0.73
SPIDR-210	ENST00000519362	ZNF565	Q8N9K5	539 aa		10.48	□□□□□ -0.73
SPIDR-210	ENST00000519362	USB1	Q9BQ65	265 aa	Known RBP	10.48	□□□□□ -0.73
SPIDR-210	ENST00000519362	AMDHD2	Q9Y303	409 aa		10.48	□□□□□ -0.73
SPIDR-210	ENST00000519362	SLC25A15	Q9Y619	301 aa		10.48	□□□□□ -0.73
SPIDR-210	ENST00000519362	SESN1	Q9Y6P5	492 aa		10.48	□□□□□ -0.73
SPIDR-210	ENST00000519362	IGHV2OR16-5	A0A0B4J2B6	119 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362		A0A1B0GWJ7	208 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	TEX46	H3BTG2	121 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362		K7EPK0	472 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	NXPH2	O95156	264 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	GRP	P07492	148 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	RPL12	P30050	165 aa	Known RBP	10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	MBNL2	Q5VZF2	373 aa	Known RBP	10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	MOB1B	Q7L9L4	216 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	C1orf174	Q8IYL3	243 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	H1FOO	Q8IZA3	346 aa	Predicted RBP	10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	FAM71E2	Q8N5Q1	922 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	SLC35G3	Q8N808	338 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	SNIP1	Q8TAD8	396 aa	Known RBP	10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	PLPPR1	Q8TBJ4	325 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	LRRC20	Q8TCA0	184 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	LINC00052	Q96N35	136 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	TLNRD1	Q9H1K6	362 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	ZFP57	Q9NU63	452 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	FBXO9	Q9UK97	447 aa	Predicted RBP	10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	LAMA5	O15230	3695 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	PRRC2C	Q9Y520	2896 aa	Known RBP	10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	KRBOX1	C9JBD0	128 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	SIRPB1	O00241	398 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	CDS2	O95674	445 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	CRYAB	P02511	175 aa	Known RBP	10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	EIF2S3L	Q2VIR3	472 aa	Known RBP	10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	TMEM268	Q5VZI3	342 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362		Q6ZR03	302 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	OR52M1	Q8NGK5	317 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	OR4D5	Q8NGN0	318 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	OR10J5	Q8NHC4	309 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	CXXC4	Q9H2H0	198 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	NARFL	Q9H6Q4	476 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	PLEKHA2	Q9HB19	425 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	CCL28	Q9NRJ3	127 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	MBNL3	Q9NUK0	354 aa	Known RBP	10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	WASF3	Q9UPY6	502 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	OR2W1	Q9Y3N9	320 aa		10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	LSM5	Q9Y4Y9	91 aa	Known RBP	10.47	□□□□□ -0.73
SPIDR-210	ENST00000519362	RIF1	Q5UIP0	2472 aa	Known RBP	10.46	□□□□□ -0.73
SPIDR-210	ENST00000519362	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	10.46	□□□□□ -0.74
SPIDR-210	ENST00000519362		E5RGE8	158 aa		10.46	□□□□□ -0.74
SPIDR-210	ENST00000519362	SH2D1B	O14796	132 aa		10.46	□□□□□ -0.74
SPIDR-210	ENST00000519362	CRYZL1	O95825	349 aa		10.46	□□□□□ -0.74
SPIDR-210	ENST00000519362	LMO1	P25800	156 aa		10.46	□□□□□ -0.74
SPIDR-210	ENST00000519362	UCP1	P25874	307 aa		10.46	□□□□□ -0.74
SPIDR-210	ENST00000519362	TIMP3	P35625	211 aa		10.46	□□□□□ -0.74
SPIDR-210	ENST00000519362	ZNF718	Q3SXZ3	478 aa		10.46	□□□□□ -0.74
SPIDR-210	ENST00000519362	C1orf185	Q5T7R7	199 aa		10.46	□□□□□ -0.74
SPIDR-210	ENST00000519362	ZNF474	Q6S9Z5	364 aa	Predicted RBP	10.46	□□□□□ -0.74
SPIDR-210	ENST00000519362	MEX3B	Q6ZN04	569 aa	Known RBP	10.46	□□□□□ -0.74
SPIDR-210	ENST00000519362	RPRML	Q8N4K4	120 aa		10.46	□□□□□ -0.74
SPIDR-210	ENST00000519362	KIRREL1	Q96J84	757 aa		10.46	□□□□□ -0.74
SPIDR-210	ENST00000519362	NUP50	Q9UKX7	468 aa		10.46	□□□□□ -0.74
SPIDR-210	ENST00000519362	SSUH2	Q9Y2M2	353 aa		10.46	□□□□□ -0.74
SPIDR-210	ENST00000519362	NSG2	Q9Y328	171 aa		10.46	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms