RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 AKR7LQ8NHP1 331 aa15.74■□□□□ 0.11
SDC2-202ENST00000518385 C1QTNF5Q9BXJ0 243 aa15.74■□□□□ 0.11
SDC2-202ENST00000518385 IL36GQ9NZH8 169 aa15.74■□□□□ 0.11
SDC2-202ENST00000518385 LINC00587B1AMM8 73 aa15.73■□□□□ 0.11
SDC2-202ENST00000518385 K7N7A8 449 aa15.73■□□□□ 0.11
SDC2-202ENST00000518385 SERPINA2P20848 420 aa15.73■□□□□ 0.11
SDC2-202ENST00000518385 PIGPP57054 158 aa15.73■□□□□ 0.11
SDC2-202ENST00000518385 ZNF616Q08AN1 781 aa15.73■□□□□ 0.11
SDC2-202ENST00000518385 SRSF7Q16629 238 aaKnown RBP eCLIP15.73■□□□□ 0.11
SDC2-202ENST00000518385 CRIP3Q6Q6R5 217 aa15.73■□□□□ 0.11
SDC2-202ENST00000518385 COLCA1Q6ZS62 124 aa15.73■□□□□ 0.11
SDC2-202ENST00000518385 ZNF565Q8N9K5 539 aa15.73■□□□□ 0.11
SDC2-202ENST00000518385 OR13D1Q8NGV5 346 aa15.73■□□□□ 0.11
SDC2-202ENST00000518385 SPSB4Q96A44 273 aa15.73■□□□□ 0.11
SDC2-202ENST00000518385 ABHD17AQ96GS6 310 aa15.73■□□□□ 0.11
SDC2-202ENST00000518385 SLC25A31Q9H0C2 315 aa15.73■□□□□ 0.11
SDC2-202ENST00000518385 SPRR3Q9UBC9 169 aa15.73■□□□□ 0.11
SDC2-202ENST00000518385 LOC400499M0QZD8 3231 aa15.72■□□□□ 0.11
SDC2-202ENST00000518385 A0A1W2PP11 408 aa15.72■□□□□ 0.11
SDC2-202ENST00000518385 C5orf63A6NC05 138 aa15.72■□□□□ 0.11
SDC2-202ENST00000518385 PRH1P02810 166 aa15.72■□□□□ 0.11
SDC2-202ENST00000518385 FAHP16930 419 aa15.72■□□□□ 0.11
SDC2-202ENST00000518385 ANOS1P23352 680 aa15.72■□□□□ 0.11
SDC2-202ENST00000518385 UBE2V2Q15819 145 aa15.72■□□□□ 0.11
SDC2-202ENST00000518385 HIKESHIQ53FT3 197 aa15.72■□□□□ 0.11
SDC2-202ENST00000518385 SOHLH1Q5JUK2 328 aa15.72■□□□□ 0.11
SDC2-202ENST00000518385 KRBOX4Q5JUW0 171 aa15.72■□□□□ 0.11
SDC2-202ENST00000518385 TMEM42Q69YG0 159 aa15.72■□□□□ 0.11
SDC2-202ENST00000518385 LHFPL2Q6ZUX7 228 aa15.72■□□□□ 0.11
SDC2-202ENST00000518385 RTN4RL2Q86UN3 420 aa15.72■□□□□ 0.11
SDC2-202ENST00000518385 SUMF2Q8NBJ7 301 aa15.72■□□□□ 0.11
SDC2-202ENST00000518385 RTN4IP1Q8WWV3 396 aaPredicted RBP15.72■□□□□ 0.11
SDC2-202ENST00000518385 EXTL1Q92935 676 aa15.72■□□□□ 0.11
SDC2-202ENST00000518385 GNPNAT1Q96EK6 184 aaPredicted RBP15.72■□□□□ 0.11
SDC2-202ENST00000518385 GMPPAQ96IJ6 420 aaPredicted RBP15.72■□□□□ 0.11
SDC2-202ENST00000518385 ZNF286AQ9HBT8 521 aa15.72■□□□□ 0.11
SDC2-202ENST00000518385 PRR13Q9NZ81 148 aa15.72■□□□□ 0.11
SDC2-202ENST00000518385 ZNF407Q9C0G0 2248 aa15.72■□□□□ 0.11
SDC2-202ENST00000518385 A0A1W2PPH5 198 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 C1QTNF9BB2RNN3 333 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 B4DEV8 164 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 AQP7O14520 342 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 PITX3O75364 302 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 IGHV2-70P01814 119 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 HBE1P02100 147 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 OR8U8P0C7N1 319 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 C1QTNF9P0C862 333 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 HOXA5P20719 270 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 HEPN1Q6WQI6 88 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 FBXW12Q6X9E4 464 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 SLC16A13Q7RTY0 426 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 FOXRED2Q8IWF2 684 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 OR10G4Q8NGN3 311 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 FGFBP3Q8TAT2 258 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 MOB3AQ96BX8 217 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 YPEL4Q96NS1 127 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 TAAR6Q96RI8 345 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 PLSCR2Q9NRY7 297 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 KIAA1456Q9P272 454 aa15.71■□□□□ 0.11
SDC2-202ENST00000518385 A6NLC8 198 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 PATE4P0C8F1 98 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 BAXQ07812 192 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 RNF144BQ7Z419 303 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 HPSE2Q8WWQ2 592 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 ERGIC1Q969X5 290 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 RBMXL1Q96E39 390 aaKnown RBP15.7■□□□□ 0.1
SDC2-202ENST00000518385 MIOXQ9UGB7 285 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 DNAJC13O75165 2243 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 hCG_38984A0A1B0GV85 526 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 OR2C1O95371 312 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 IGHV3-9P01782 118 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 TMEM225BP0DP42 221 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 RND3P61587 244 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 PLP2Q04941 152 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 FAM209BQ5JX69 171 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 FBXW9Q5XUX1 488 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 Q6ZS49 121 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 NUFIP2Q7Z417 695 aaKnown RBP15.7■□□□□ 0.1
SDC2-202ENST00000518385 OR4D5Q8NGN0 318 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 NANOS1Q8WY41 292 aaKnown RBP15.7■□□□□ 0.1
SDC2-202ENST00000518385 RSRP1Q9BUV0 290 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 TOLLIPQ9H0E2 274 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 TP53TG5Q9Y2B4 290 aa15.7■□□□□ 0.1
SDC2-202ENST00000518385 ELOA3CA0A087WX78 387 aaPredicted RBP15.69■□□□□ 0.1
SDC2-202ENST00000518385 FAM230AA0A1W2PPH8 454 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 FAM90A10PA6NDY2 464 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 FAM90A18PA6NE21 464 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 FAM90A16PA6NEW6 464 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 FAM90A20PA6NIJ5 464 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 FAM90A8PA6NJQ4 464 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 FAM90A7PA6NKC0 464 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 ZNF729A6NN14 1252 aaPredicted RBP15.69■□□□□ 0.1
SDC2-202ENST00000518385 ZNF850A8MQ14 1090 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 FAM90A22PA8MWA6 464 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 FAM90A12PA8MX19 464 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 FAM90A5PA8MXJ8 464 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 FAM90A23PA8MXZ1 464 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 SS18L1O75177 396 aaPredicted RBP15.69■□□□□ 0.1
SDC2-202ENST00000518385 SCGB1D2O95969 90 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 HSPB1P04792 205 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms