RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 LINC00596Q86U02 117 aa11.36□□□□□ -0.59
PDGFRB-202ENST00000517488 RTN4RL2Q86UN3 420 aa11.36□□□□□ -0.59
PDGFRB-202ENST00000517488 TMEM219Q86XT9 240 aa11.36□□□□□ -0.59
PDGFRB-202ENST00000517488 CDH26Q8IXH8 852 aa11.36□□□□□ -0.59
PDGFRB-202ENST00000517488 MS4A15Q8N5U1 240 aa11.36□□□□□ -0.59
PDGFRB-202ENST00000517488 ZNF565Q8N9K5 539 aa11.36□□□□□ -0.59
PDGFRB-202ENST00000517488 RFESDQ8TAC1 157 aa11.36□□□□□ -0.59
PDGFRB-202ENST00000517488 MRGPRDQ8TDS7 321 aa11.36□□□□□ -0.59
PDGFRB-202ENST00000517488 KIRREL1Q96J84 757 aa11.36□□□□□ -0.59
PDGFRB-202ENST00000517488 CITED1Q99966 193 aa11.36□□□□□ -0.59
PDGFRB-202ENST00000517488 ZNF696Q9H7X3 374 aa11.36□□□□□ -0.59
PDGFRB-202ENST00000517488 PCDHB16Q9NRJ7 776 aa11.36□□□□□ -0.59
PDGFRB-202ENST00000517488 ABCB10Q9NRK6 738 aa11.36□□□□□ -0.59
PDGFRB-202ENST00000517488 CALYQ9NYX4 217 aa11.36□□□□□ -0.59
PDGFRB-202ENST00000517488 TCF19Q9Y242 345 aa11.36□□□□□ -0.59
PDGFRB-202ENST00000517488 ATP6V1G2O95670 118 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 IL1AP01583 271 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 IGLV1-47P01700 117 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 NFYBP25208 207 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 MAP2K4P45985 399 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 HSPA13P48723 471 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 DYNLT3P51808 116 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 GPR50Q13585 617 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 GPR176Q14439 515 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 MPV17LQ2QL34 196 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 LIPKQ5VXJ0 399 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 AWAT2Q6E213 333 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 CEACAM19Q7Z692 300 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 LRRTM1Q86UE6 522 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 TMEM104Q8NE00 496 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 ZNF596Q8TC21 504 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 THRSPQ92748 146 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 UFD1Q92890 307 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 TMEM203Q969S6 136 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 CNBD2Q96M20 576 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 CCDC90BQ9GZT6 254 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 BANF2Q9H503 90 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 LINC00574Q9H8X3 128 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 RAB18Q9NP72 206 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 DPM3Q9P2X0 92 aa11.35□□□□□ -0.59
PDGFRB-202ENST00000517488 A0A087X0M5 115 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 A0A1B0GX30 115 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 NPIPB11E5RHQ5 1161 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 TOR1AO14656 332 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 SC5DO75845 299 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 IGHV3-7P01780 117 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 HSMCR30P0CW71 290 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 SSTR5P35346 364 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 VHLP40337 213 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 KIR2DS4P43632 304 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 TPBGQ13641 420 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 LTC4SQ16873 150 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 HLA-DRB5Q30154 266 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 LIAT1Q6ZQX7 453 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 PRSS48Q7RTY5 328 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 NKAIN3Q8N8D7 197 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 OR4C13Q8NGP0 309 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 LEAP2Q969E1 77 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 MRPS24Q96EL2 167 aaKnown RBP11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 CYYR1Q96J86 154 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 UQCC2Q9BRT2 126 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 SELENOIQ9C0D9 397 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 TCF7L1Q9HCS4 588 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 IDI2-AS1Q9NZ38 188 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 FBLN5Q9UBX5 448 aa11.34□□□□□ -0.59
PDGFRB-202ENST00000517488 PKD1L1Q8TDX9 2849 aa11.33□□□□□ -0.6
PDGFRB-202ENST00000517488 TMEM30CPA0ZSE6 113 aa11.33□□□□□ -0.6
PDGFRB-202ENST00000517488 FAM90A22PA8MWA6 464 aa11.33□□□□□ -0.6
PDGFRB-202ENST00000517488 LY6LH3BQJ8 138 aa11.33□□□□□ -0.6
PDGFRB-202ENST00000517488 F2RL2O00254 374 aa11.33□□□□□ -0.6
PDGFRB-202ENST00000517488 CRTAPO75718 401 aaPredicted RBP11.33□□□□□ -0.6
PDGFRB-202ENST00000517488 MT-ND4P03905 459 aa11.33□□□□□ -0.6
PDGFRB-202ENST00000517488 UCHL1P09936 223 aa11.33□□□□□ -0.6
PDGFRB-202ENST00000517488 MGMTP16455 207 aa11.33□□□□□ -0.6
PDGFRB-202ENST00000517488 RPS25P62851 125 aaKnown RBP11.33□□□□□ -0.6
PDGFRB-202ENST00000517488 RBM39Q14498 530 aaKnown RBP11.33□□□□□ -0.6
PDGFRB-202ENST00000517488 RBM48Q5RL73 367 aaKnown RBP11.33□□□□□ -0.6
PDGFRB-202ENST00000517488 TMEM91Q6ZNR0 172 aa11.33□□□□□ -0.6
PDGFRB-202ENST00000517488 NEK7Q8TDX7 302 aa11.33□□□□□ -0.6
PDGFRB-202ENST00000517488 CCDC107Q8WV48 283 aa11.33□□□□□ -0.6
PDGFRB-202ENST00000517488 FAM46BQ96A09 425 aa11.33□□□□□ -0.6
PDGFRB-202ENST00000517488 NPFFR1Q9GZQ6 430 aa11.33□□□□□ -0.6
PDGFRB-202ENST00000517488 RANBP3Q9H6Z4 567 aaPredicted RBP11.33□□□□□ -0.6
PDGFRB-202ENST00000517488 RCC2Q9P258 522 aaKnown RBP11.33□□□□□ -0.6
PDGFRB-202ENST00000517488 LEUTXA8MZ59 168 aa11.32□□□□□ -0.6
PDGFRB-202ENST00000517488 BUB1B-PAK6H3BSN5 160 aa11.32□□□□□ -0.6
PDGFRB-202ENST00000517488 SRMP19623 302 aa11.32□□□□□ -0.6
PDGFRB-202ENST00000517488 CD24P25063 80 aa11.32□□□□□ -0.6
PDGFRB-202ENST00000517488 EFNB2P52799 333 aa11.32□□□□□ -0.6
PDGFRB-202ENST00000517488 PRRX1P54821 245 aa11.32□□□□□ -0.6
PDGFRB-202ENST00000517488 MLLT11Q13015 90 aaPredicted RBP11.32□□□□□ -0.6
PDGFRB-202ENST00000517488 HSD17B12Q53GQ0 312 aa11.32□□□□□ -0.6
PDGFRB-202ENST00000517488 FBLN7Q53RD9 439 aa11.32□□□□□ -0.6
PDGFRB-202ENST00000517488 TPTE2P1Q5T6R2 138 aa11.32□□□□□ -0.6
PDGFRB-202ENST00000517488 SIGIRRQ6IA17 410 aa11.32□□□□□ -0.6
PDGFRB-202ENST00000517488 RAB12Q6IQ22 244 aa11.32□□□□□ -0.6
PDGFRB-202ENST00000517488 ZNF497Q6ZNH5 498 aa11.32□□□□□ -0.6
PDGFRB-202ENST00000517488 OR9G1Q8NH87 305 aa11.32□□□□□ -0.6
PDGFRB-202ENST00000517488 UBALD1Q8TB05 177 aa11.32□□□□□ -0.6
PDGFRB-202ENST00000517488 PHYHIPQ92561 330 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms