RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 OR10AC1Q8NH08 325 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 EXOC6Q8TAG9 804 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 SLC7A13Q8TCU3 470 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 SGTBQ96EQ0 304 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 PLEKHA8Q96JA3 519 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 MTMR9Q96QG7 549 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 SPACA5Q96QH8 159 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 MRPL20Q9BYC9 149 aaKnown RBP-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 ROPN1BQ9BZX4 212 aaPredicted RBP-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 ARV1Q9H2C2 271 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 ASB7Q9H672 318 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 NMRAL1Q9HBL8 299 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 SLC39A1Q9NY26 324 aa-3.17□□□□□ -2.92
RNU6-539P-201ENST00000516665 MAP3K19Q56UN5 1328 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 NOS1P29475 1434 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 IGHV1-45A0A0A0MS14 117 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 TRBV6-8A0A0A6YYG3 113 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 A0A1W2PQD3 144 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 IRGMA1A4Y4 181 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 ODAMA1E959 279 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 BRS3P32247 399 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 GPR1P46091 355 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 ACLYP53396 1101 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 RAB4BP61018 213 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 OR1Q1Q15612 314 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 TMEM41BQ5BJD5 291 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 STEAP4Q687X5 459 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 PYHIN1Q6K0P9 492 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 PSTKQ8IV42 348 aaKnown RBP-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 MFSD9Q8NBP5 474 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 OR56B1Q8NGI3 324 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 OR1L8Q8NGR8 309 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 WFDC5Q8TCV5 224 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 NAPGQ99747 312 aaPredicted RBP-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 ELOVL3Q9HB03 270 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 TMEM100Q9NV29 134 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 SLC22A14Q9Y267 594 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 ABCA1O95477 2261 aa-3.18□□□□□ -2.92
RNU6-539P-201ENST00000516665 DSCAMO60469 2012 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 ATP10AO60312 1499 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 IGHV3OR15-7A0A075B7D8 119 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 TRBV2A0A0J9YWF9 115 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 GOLGA6L10A6NI86 522 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 OR5K4A6NMS3 321 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 GPR31O00270 319 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 BHLHE40O14503 412 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 ERLIN1O75477 346 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 RHOCP08134 193 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 CT45A6P0DMU7 189 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 CT45A5P0DMU8 189 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 CT45A7P0DMV0 189 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 PRKACAP17612 351 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 CSNK2A2P19784 350 aaPredicted RBP-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 RAB31Q13636 194 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 DDX39BQ13838 428 aaKnown RBP-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 GOLGA7BQ2TAP0 167 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 MRPL51Q4U2R6 128 aaKnown RBP-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 CT45A1Q5HYN5 189 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 OR52E1Q8NGJ3 308 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 CT45A3Q8NHU0 189 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 STMN2Q93045 179 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 SPRR2FQ96RM1 72 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 UQCC2Q9BRT2 126 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 MRPL13Q9BYD1 178 aaKnown RBP-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 MMADHCQ9H3L0 296 aaPredicted RBP-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 C11orf1Q9H5F2 150 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 ACER3Q9NUN7 267 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 MRPL27Q9P0M9 148 aaKnown RBP-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 NUDCQ9Y266 331 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 ZNF257Q9Y2Q1 563 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 WASHC3Q9Y3C0 194 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 GVINP1Q7Z2Y8 2422 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 NRCAMQ92823 1304 aa-3.19□□□□□ -2.92
RNU6-539P-201ENST00000516665 ANKRD11Q6UB99 2663 aaPredicted RBP-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 GREB1Q4ZG55 1949 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 A6NDN8 102 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 PRRG1O14668 218 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 SSX5O60225 188 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 COX7A2P2O60397 106 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 SLC16A7O60669 478 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 UCHL1P09936 223 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 PBLDP30039 288 aaPredicted RBP-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 CCR2P41597 374 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 NUCB2P80303 420 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 KDSRQ06136 332 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 CLLU1OSQ5K130 101 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 TMEM123Q8N131 208 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 PROKR2Q8NFJ6 384 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 RPS4Y2Q8TD47 263 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 MIEN1Q9BRT3 115 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 C1QTNF6Q9BXI9 259 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 CHST6Q9GZX3 395 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 METTL17Q9H7H0 456 aaPredicted RBP-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 ATXN10Q9UBB4 475 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 TEX15Q9BXT5 2789 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 NPHP4O75161 1426 aaPredicted RBP-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 RPGRIP1LQ68CZ1 1315 aa-3.2□□□□□ -2.92
RNU6-539P-201ENST00000516665 CUBNO60494 3623 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 A0A1W2PRV1 198 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 OR51F1A6NGY5 319 aa-3.21□□□□□ -2.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms