RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 BRICD5Q6PL45 260 aa9.76□□□□□ -0.85
SNF8-215ENST00000515572 ZNF497Q6ZNH5 498 aa9.76□□□□□ -0.85
SNF8-215ENST00000515572 C9orf139Q6ZV77 190 aa9.76□□□□□ -0.85
SNF8-215ENST00000515572 C11orf42Q8N5U0 333 aa9.76□□□□□ -0.85
SNF8-215ENST00000515572 RAB2BQ8WUD1 216 aa9.76□□□□□ -0.85
SNF8-215ENST00000515572 LHX4Q969G2 390 aa9.76□□□□□ -0.85
SNF8-215ENST00000515572 SLC25A46Q96AG3 418 aa9.76□□□□□ -0.85
SNF8-215ENST00000515572 SIRT7Q9NRC8 400 aa9.76□□□□□ -0.85
SNF8-215ENST00000515572 PLEKHJ1Q9NW61 149 aa9.76□□□□□ -0.85
SNF8-215ENST00000515572 ETAA1Q9NY74 926 aa9.76□□□□□ -0.85
SNF8-215ENST00000515572 ABRACLQ9P1F3 81 aa9.76□□□□□ -0.85
SNF8-215ENST00000515572 NAV3Q8IVL0 2385 aa9.76□□□□□ -0.85
SNF8-215ENST00000515572 KIAA2026Q5HYC2 2103 aa9.76□□□□□ -0.85
SNF8-215ENST00000515572 A0A0A6YYD4 124 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 A0A0B4J203 849 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 IGHV1-69DA0A0B4J2H0 117 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 CENPVL3A0A0U1RRI6 287 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 FOXI3A8MTJ6 420 aaPredicted RBP9.75□□□□□ -0.85
SNF8-215ENST00000515572 SOCS1O15524 211 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 NOL3O60936 208 aaKnown RBP9.75□□□□□ -0.85
SNF8-215ENST00000515572 CLPXO76031 633 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 SCGNO76038 276 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 IGHV1-69P01742 117 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 MT-ND4P03905 459 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 IGHV1-8P0DP01 117 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 IGHV4-38-2P0DP08 117 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 SNRPBP14678 240 aaKnown RBP9.75□□□□□ -0.85
SNF8-215ENST00000515572 GZMHP20718 246 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 GLP1RP43220 463 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 VEGFCP49767 419 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 ARL6IP1Q15041 203 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 OR52W1Q6IF63 320 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 TRAT1Q6PIZ9 186 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 HEPN1Q6WQI6 88 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 USP43Q70EL4 1123 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 C6orf201Q7Z4U5 140 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 CLVS1Q8IUQ0 354 aaPredicted RBP9.75□□□□□ -0.85
SNF8-215ENST00000515572 GAPTQ8N292 157 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 LGALS14Q8TCE9 139 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 TNFRSF14Q92956 283 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 KCTD12Q96CX2 325 aaKnown RBP9.75□□□□□ -0.85
SNF8-215ENST00000515572 FAAP24Q9BTP7 215 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 MS4A7Q9GZW8 240 aaPredicted RBP9.75□□□□□ -0.85
SNF8-215ENST00000515572 NAA50Q9GZZ1 169 aaKnown RBP9.75□□□□□ -0.85
SNF8-215ENST00000515572 ATG5Q9H1Y0 275 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 RIMS4Q9H426 269 aaPredicted RBP9.75□□□□□ -0.85
SNF8-215ENST00000515572 HEXA-AS1Q9H8Q6 139 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 RAB9BQ9NP90 201 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 SPATA2Q9UM82 520 aa9.75□□□□□ -0.85
SNF8-215ENST00000515572 KBTBD11-OT1A0A1B0GTJ5 212 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 MEX3AA1L020 520 aaKnown RBP9.74□□□□□ -0.85
SNF8-215ENST00000515572 UBE2QL1A1L167 161 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 POM121CA8CG34 1229 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 RNASEK-C17orf49H0YIS7 233 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 ORC5O43913 435 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 IFNA2P01563 188 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 CGB3P0DN86 165 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 CGB7P0DN87 165 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 HOXB4P17483 251 aaPredicted RBP9.74□□□□□ -0.85
SNF8-215ENST00000515572 RORCP51449 518 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 UBE2E1P51965 193 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 EFNB2P52799 333 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 RIPPLY3P57055 190 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 PLA2G7Q13093 441 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 Q6ZTK2 550 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 ZNF554Q86TJ5 538 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 OR10A7Q8NGE5 316 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 OR13A1Q8NGR1 328 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 OR10R2Q8NGX6 335 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 MRGPRDQ8TDS7 321 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 RAB3CQ96E17 227 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 SULT4A1Q9BR01 284 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 LINC00574Q9H8X3 128 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 CALYQ9NYX4 217 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 ZNF69Q9UC07 566 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 TRAPPC2LQ9UL33 140 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 SESN1Q9Y6P5 492 aa9.74□□□□□ -0.85
SNF8-215ENST00000515572 NIPBLQ6KC79 2804 aaeCLIP9.74□□□□□ -0.85
SNF8-215ENST00000515572 RAB27BO00194 218 aa9.73□□□□□ -0.85
SNF8-215ENST00000515572 PAHP00439 452 aa9.73□□□□□ -0.85
SNF8-215ENST00000515572 CDK2P24941 298 aa9.73□□□□□ -0.85
SNF8-215ENST00000515572 DYNC1I2Q13409 638 aaKnown RBP9.73□□□□□ -0.85
SNF8-215ENST00000515572 C17orf58Q2M2W7 97 aa9.73□□□□□ -0.85
SNF8-215ENST00000515572 TMEM30BQ3MIR4 351 aa9.73□□□□□ -0.85
SNF8-215ENST00000515572 MIDNQ504T8 468 aa9.73□□□□□ -0.85
SNF8-215ENST00000515572 PLAC9Q5JTB6 97 aa9.73□□□□□ -0.85
SNF8-215ENST00000515572 C6orf183Q5T699 404 aa9.73□□□□□ -0.85
SNF8-215ENST00000515572 OR13D1Q8NGV5 346 aa9.73□□□□□ -0.85
SNF8-215ENST00000515572 ACOT12Q8WYK0 555 aa9.73□□□□□ -0.85
SNF8-215ENST00000515572 AP3S1Q92572 193 aa9.73□□□□□ -0.85
SNF8-215ENST00000515572 DYRK2Q92630 601 aa9.73□□□□□ -0.85
SNF8-215ENST00000515572 PHF21AQ96BD5 680 aa9.73□□□□□ -0.85
SNF8-215ENST00000515572 ARHGAP5-AS1Q96IT6 56 aa9.73□□□□□ -0.85
SNF8-215ENST00000515572 SUCNR1Q9BXA5 334 aa9.73□□□□□ -0.85
SNF8-215ENST00000515572 PECRQ9BY49 303 aa9.73□□□□□ -0.85
SNF8-215ENST00000515572 DCSTAMPQ9H295 470 aa9.73□□□□□ -0.85
SNF8-215ENST00000515572 TMEM133Q9H2Q1 129 aa9.73□□□□□ -0.85
SNF8-215ENST00000515572 MBNL3Q9NUK0 354 aaKnown RBP9.73□□□□□ -0.85
SNF8-215ENST00000515572 RHBDL2Q9NX52 303 aa9.73□□□□□ -0.85
SNF8-215ENST00000515572 MXRA5Q9NR99 2828 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms