RNA–Protein interactions for RNA: ENST00000515460.5

NUP54-218, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-218ENST00000515460 ZNF705GA8MUZ8 300 aaPredicted RBP4.68□□□□□ -1.66
NUP54-218ENST00000515460 C17orf105B2RV13 164 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 E7EQ34 232 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 CTDSPLO15194 276 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 SCGB2A1O75556 95 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 OR2C1O95371 312 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 OR5G3P0C626 314 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 LAMP1P11279 417 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 PVRP15151 417 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 GPX2P18283 190 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 PSMB5P28074 263 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 SNCAP37840 140 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 RPL3P39023 403 aaKnown RBP4.68□□□□□ -1.66
NUP54-218ENST00000515460 CDKN2BP42772 138 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 CSNK1A1P48729 337 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 NPY4RP50391 375 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 PGGT1BP53609 377 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 OR4D2P58180 307 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 TAS2R19P59542 299 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 DYNLT1P63172 113 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 SLC35A1P78382 337 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 OLIG2Q13516 323 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 CRMP1Q14194 572 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 CEBPEQ15744 281 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 ZIC1Q15915 447 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 PRSS8Q16651 343 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 TMEM183BQ1AE95 376 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 SNAI3Q3KNW1 292 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 IFI44LQ53G44 452 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 XKR7Q5GH72 579 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 CTSL3PQ5NE16 218 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 TMEM69Q5SWH9 247 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 C1orf189Q5VU69 101 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 C22orf42Q6IC83 251 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 OR2T2Q6IF00 324 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 ZNF770Q6IQ21 691 aaPredicted RBP4.68□□□□□ -1.66
NUP54-218ENST00000515460 RHBDD2Q6NTF9 364 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 FAHD1Q6P587 224 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 APOOLQ6UXV4 268 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 Q6ZS92 163 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 MBOAT2Q6ZWT7 520 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 SLC25A26Q70HW3 274 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 GLT6D1Q7Z4J2 308 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 ZDHHC21Q8IVQ6 265 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 ZNF567Q8N184 647 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 GBGT1Q8N5D6 347 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 FAM24BQ8N5W8 94 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 PLPP5Q8NEB5 264 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 ACVR1CQ8NER5 493 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 SLC30A7Q8NEW0 376 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 OR4K2Q8NGD2 314 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 OR52E1Q8NGJ3 308 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 OR4A4PQ8NGN8 299 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 FLVCR1-AS1Q8TAF5 88 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 GPR146Q96CH1 333 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 NTNG2Q96CW9 530 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 MRAP2Q96G30 205 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 C5orf30Q96GV9 206 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 ACY3Q96HD9 319 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 MRPL57Q9BQC6 102 aaKnown RBP4.68□□□□□ -1.66
NUP54-218ENST00000515460 RAB11FIP5Q9BXF6 653 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 CHIAQ9BZP6 476 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 CXXC4Q9H2H0 198 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 RBKSQ9H477 322 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 WDR54Q9H977 334 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 TXNL4BQ9NX01 149 aaKnown RBP4.68□□□□□ -1.66
NUP54-218ENST00000515460 STRAPQ9Y3F4 350 aaKnown RBP4.68□□□□□ -1.66
NUP54-218ENST00000515460 CSAG2Q9Y5P2 127 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 PTGDR2Q9Y5Y4 395 aa4.68□□□□□ -1.66
NUP54-218ENST00000515460 IGLV3-16A0A075B6K0 115 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 ANKRD61A6NGH8 418 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 TVP23AA6NH52 213 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 OR6C76A6NM76 312 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 DHRS7CA6NNS2 312 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 G3V4G9 280 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 J3QR06 171 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 M0QZ24 198 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 SLC17A3O00476 420 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 GABRPO00591 440 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 RBFOX2O43251 390 aaKnown RBP eCLIP4.67□□□□□ -1.66
NUP54-218ENST00000515460 ADAM20O43506 726 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 SCGNO76038 276 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 GLSO94925 669 aaPredicted RBP4.67□□□□□ -1.66
NUP54-218ENST00000515460 LRATO95237 230 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 BRI3O95415 125 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 CHRM4P08173 479 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 PRSS56P0CW18 603 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 CT45A8P0DMV1 189 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 CT45A9P0DMV2 189 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 CD37P11049 281 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 ATP1B2P14415 290 aaPredicted RBP4.67□□□□□ -1.66
NUP54-218ENST00000515460 CD22P20273 847 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 PSMB1P20618 241 aaKnown RBP4.67□□□□□ -1.66
NUP54-218ENST00000515460 KITLGP21583 273 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 MMP11P24347 488 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 CMPK1P30085 196 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 ADRA1AP35348 466 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 APLNRP35414 380 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 AQP2P41181 271 aa4.67□□□□□ -1.66
NUP54-218ENST00000515460 PRLHRP49683 370 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms