RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 TAS2R3Q9NYW6 316 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 CALYQ9NYX4 217 aa9.26□□□□□ -0.93
VCAN-212ENST00000515397 KBTBD11-OT1A0A1B0GTJ5 212 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 A6NDX4 124 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 TOR1AO14656 332 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 CRTAPO75718 401 aaPredicted RBP9.25□□□□□ -0.93
VCAN-212ENST00000515397 GTF2F2P13984 249 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 FSTP19883 344 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 HTR1DP28221 377 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 SSTR5P35346 364 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 RPL15P61313 204 aaKnown RBP9.25□□□□□ -0.93
VCAN-212ENST00000515397 BLCAPP62952 87 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 SLC35A2P78381 396 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 AWAT2Q6E213 333 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 UNQ9370/PRO34162Q6UXP9 181 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 NEK7Q8TDX7 302 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 FAM46BQ96A09 425 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 RBMXL1Q96E39 390 aaKnown RBP9.25□□□□□ -0.93
VCAN-212ENST00000515397 KIRREL1Q96J84 757 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 ANKRD60Q9BZ19 345 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 SELENOIQ9C0D9 397 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 KCNK15Q9H427 330 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 DUSP21Q9H596 190 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 IL36GQ9NZH8 169 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 OR6C3Q9NZP0 311 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 DPM3Q9P2X0 92 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 TCF19Q9Y242 345 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 TPRKBQ9Y3C4 175 aa9.25□□□□□ -0.93
VCAN-212ENST00000515397 UBE2QL1A1L167 161 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 SH2D7A6NKC9 451 aaPredicted RBP9.24□□□□□ -0.93
VCAN-212ENST00000515397 ZNF729A6NN14 1252 aaPredicted RBP9.24□□□□□ -0.93
VCAN-212ENST00000515397 VGLL3A8MV65 326 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 F2RL2O00254 374 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 RGS10O43665 173 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 CD1AP06126 327 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 VSIG10L2P0DP72 767 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 CRHBPP24387 322 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 GNG10P50151 68 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 RPS25P62851 125 aaKnown RBP9.24□□□□□ -0.93
VCAN-212ENST00000515397 DIAPH2-AS1Q14236 149 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 AANATQ16613 207 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 MINOS1Q5TGZ0 78 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 RNLSQ5VYX0 342 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 OR52W1Q6IF63 320 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 LRRTM1Q86UE6 522 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 LYPD6Q86Y78 171 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 LYG1Q8N1E2 194 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 ZNF565Q8N9K5 539 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 IDI2-AS1Q9NZ38 188 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 MINOS1-NBL1R4GNA1 71 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 CMYA5Q8N3K9 4069 aa9.24□□□□□ -0.93
VCAN-212ENST00000515397 IGHV3-43A0A0B4J1X8 118 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 BUB1B-PAK6H3BSN5 160 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 ATP6V1G2O95670 118 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 IGLV1-47P01700 117 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 MT-ND4P03905 459 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 IGHV3-43DP0DP04 118 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 MGMTP16455 207 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 KIR2DS4P43632 304 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 EFNB2P52799 333 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 BDH1Q02338 343 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 HLA-DRB5Q30154 266 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 TMEM95Q3KNT9 176 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 RBM48Q5RL73 367 aaKnown RBP9.23□□□□□ -0.93
VCAN-212ENST00000515397 PRR31Q5SQ13 230 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 TREML4Q6UXN2 200 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 RTN4RL2Q86UN3 420 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 OR4C13Q8NGP0 309 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 OR4K15Q8NH41 348 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 ARL11Q969Q4 196 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 ZNF696Q9H7X3 374 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 ZNF702PQ9H963 129 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 FBLN5Q9UBX5 448 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 PSG11Q9UQ72 335 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 PEX16Q9Y5Y5 336 aa9.23□□□□□ -0.93
VCAN-212ENST00000515397 NOTCH1P46531 2555 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 TMEM30CPA0ZSE6 113 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 LEUTXA8MZ59 168 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 LY6LH3BQJ8 138 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 J3QR06 171 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 ZNF780AO75290 641 aaPredicted RBP9.22□□□□□ -0.93
VCAN-212ENST00000515397 MPIG6BO95866 241 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 IL1AP01583 271 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 SRMP19623 302 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 MAPK3P27361 379 aaPredicted RBP9.22□□□□□ -0.93
VCAN-212ENST00000515397 CD34P28906 385 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 PRRX1P54821 245 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 GPR50Q13585 617 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 GPR176Q14439 515 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 HSD17B12Q53GQ0 312 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 NHLRC3Q5JS37 347 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 TPTE2P1Q5T6R2 138 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 SIGIRRQ6IA17 410 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 RAB12Q6IQ22 244 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 TMEM91Q6ZNR0 172 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 PRR18Q8N4B5 295 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 MS4A15Q8N5U1 240 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 KLHDC1Q8N7A1 406 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 OR2T6Q8NHC8 308 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 FAM110DQ8TAY7 271 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms