RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 KIF25Q9UIL4 384 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 RABL2BQ9UNT1 228 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 ZANQ9Y493 2812 aa17.34■□□□□ 0.37
LSM6-207ENST00000515311 MED13LQ71F56 2210 aa17.33■□□□□ 0.37
LSM6-207ENST00000515311 MEIKINA0A087WXM9 373 aa17.33■□□□□ 0.36
LSM6-207ENST00000515311 hADV38S2A0JD32 116 aa17.33■□□□□ 0.36
LSM6-207ENST00000515311 ENSAO43768 121 aaKnown RBP17.33■□□□□ 0.36
LSM6-207ENST00000515311 PITPNAQ00169 270 aa17.33■□□□□ 0.36
LSM6-207ENST00000515311 LINC00299Q6ZSB3 139 aa17.33■□□□□ 0.36
LSM6-207ENST00000515311 IZUMO1Q8IYV9 350 aa17.33■□□□□ 0.36
LSM6-207ENST00000515311 LINC00312Q9Y6C7 94 aa17.33■□□□□ 0.36
LSM6-207ENST00000515311 CELSR1Q9NYQ6 3014 aa17.33■□□□□ 0.36
LSM6-207ENST00000515311 TRBV6-6A0A0A6YYG2 114 aa17.32■□□□□ 0.36
LSM6-207ENST00000515311 TRAV20A0A0B4J274 112 aa17.32■□□□□ 0.36
LSM6-207ENST00000515311 IGHV2-70DA0A0C4DH43 119 aa17.32■□□□□ 0.36
LSM6-207ENST00000515311 TMEM235A6NFC5 223 aa17.32■□□□□ 0.36
LSM6-207ENST00000515311 HLA-DQB1P01920 261 aa17.32■□□□□ 0.36
LSM6-207ENST00000515311 LIPFP07098 398 aa17.32■□□□□ 0.36
LSM6-207ENST00000515311 CD3GP09693 182 aa17.32■□□□□ 0.36
LSM6-207ENST00000515311 MRPS15P82914 257 aaKnown RBP17.32■□□□□ 0.36
LSM6-207ENST00000515311 TMEM200BQ69YZ2 307 aa17.32■□□□□ 0.36
LSM6-207ENST00000515311 TPRX1Q8N7U7 411 aa17.32■□□□□ 0.36
LSM6-207ENST00000515311 DTX3Q8N9I9 347 aa17.32■□□□□ 0.36
LSM6-207ENST00000515311 MRPL30Q8TCC3 161 aaKnown RBP17.32■□□□□ 0.36
LSM6-207ENST00000515311 C15orf40Q8WUR7 153 aa17.32■□□□□ 0.36
LSM6-207ENST00000515311 CORO2AQ92828 525 aa17.32■□□□□ 0.36
LSM6-207ENST00000515311 MSI2Q96DH6 328 aaKnown RBP17.32■□□□□ 0.36
LSM6-207ENST00000515311 CMSS1Q9BQ75 279 aaKnown RBP17.32■□□□□ 0.36
LSM6-207ENST00000515311 ING3Q9NXR8 418 aa17.32■□□□□ 0.36
LSM6-207ENST00000515311 UBE2J1Q9Y385 318 aaPredicted RBP17.32■□□□□ 0.36
LSM6-207ENST00000515311 TRGV10A0A0A0MS01 117 aa17.31■□□□□ 0.36
LSM6-207ENST00000515311 KIR2DS1A0A191URI9 304 aa17.31■□□□□ 0.36
LSM6-207ENST00000515311 A0A1W2PPH5 198 aa17.31■□□□□ 0.36
LSM6-207ENST00000515311 A0A1W2PQ09 198 aa17.31■□□□□ 0.36
LSM6-207ENST00000515311 SMAD7O15105 426 aaKnown RBP17.31■□□□□ 0.36
LSM6-207ENST00000515311 PPIAL4GP0DN37 164 aa17.31■□□□□ 0.36
LSM6-207ENST00000515311 GNG2P59768 71 aa17.31■□□□□ 0.36
LSM6-207ENST00000515311 ARFRP1Q13795 201 aa17.31■□□□□ 0.36
LSM6-207ENST00000515311 CR1LQ2VPA4 569 aa17.31■□□□□ 0.36
LSM6-207ENST00000515311 CYB5R2Q6BCY4 276 aa17.31■□□□□ 0.36
LSM6-207ENST00000515311 TCF23Q7RTU1 214 aa17.31■□□□□ 0.36
LSM6-207ENST00000515311 FAM185AQ8N0U4 392 aa17.31■□□□□ 0.36
LSM6-207ENST00000515311 ZNF565Q8N9K5 539 aa17.31■□□□□ 0.36
LSM6-207ENST00000515311 C18orf12Q96KH6 178 aa17.31■□□□□ 0.36
LSM6-207ENST00000515311 LPAR2Q9HBW0 351 aa17.31■□□□□ 0.36
LSM6-207ENST00000515311 ARHGAP32A7KAX9 2087 aa17.31■□□□□ 0.36
LSM6-207ENST00000515311 GATA3P23771 443 aa17.3■□□□□ 0.36
LSM6-207ENST00000515311 TRAT1Q6PIZ9 186 aa17.3■□□□□ 0.36
LSM6-207ENST00000515311 MOB1BQ7L9L4 216 aa17.3■□□□□ 0.36
LSM6-207ENST00000515311 CCDC190Q86UF4 302 aa17.3■□□□□ 0.36
LSM6-207ENST00000515311 KIR3DL3Q8N743 410 aa17.3■□□□□ 0.36
LSM6-207ENST00000515311 TMEM186Q96B77 213 aa17.3■□□□□ 0.36
LSM6-207ENST00000515311 SOSTQ9BQB4 213 aa17.3■□□□□ 0.36
LSM6-207ENST00000515311 HDHD3Q9BSH5 251 aaPredicted RBP17.3■□□□□ 0.36
LSM6-207ENST00000515311 CHMP1AQ9HD42 196 aaPredicted RBP17.3■□□□□ 0.36
LSM6-207ENST00000515311 MBNL3Q9NUK0 354 aaKnown RBP17.3■□□□□ 0.36
LSM6-207ENST00000515311 ELF5Q9UKW6 265 aaPredicted RBP17.3■□□□□ 0.36
LSM6-207ENST00000515311 TRAPPC2LQ9UL33 140 aa17.3■□□□□ 0.36
LSM6-207ENST00000515311 MRPS7Q9Y2R9 242 aaKnown RBP17.3■□□□□ 0.36
LSM6-207ENST00000515311 FABP12A6NFH5 140 aa17.29■□□□□ 0.36
LSM6-207ENST00000515311 DTYMKP23919 212 aa17.29■□□□□ 0.36
LSM6-207ENST00000515311 ETV6P41212 452 aa17.29■□□□□ 0.36
LSM6-207ENST00000515311 DVL1P1P54792 670 aaPredicted RBP17.29■□□□□ 0.36
LSM6-207ENST00000515311 ZNF273Q14593 569 aa17.29■□□□□ 0.36
LSM6-207ENST00000515311 SPANXN2Q5MJ10 180 aa17.29■□□□□ 0.36
LSM6-207ENST00000515311 PYHIN1Q6K0P9 492 aa17.29■□□□□ 0.36
LSM6-207ENST00000515311 ZNF880Q6PDB4 577 aa17.29■□□□□ 0.36
LSM6-207ENST00000515311 BTNL3Q6UXE8 466 aa17.29■□□□□ 0.36
LSM6-207ENST00000515311 TRAPPC6BQ86SZ2 158 aa17.29■□□□□ 0.36
LSM6-207ENST00000515311 ZNF554Q86TJ5 538 aa17.29■□□□□ 0.36
LSM6-207ENST00000515311 GLCCI1Q86VQ1 547 aa17.29■□□□□ 0.36
LSM6-207ENST00000515311 OR4K15Q8NH41 348 aa17.29■□□□□ 0.36
LSM6-207ENST00000515311 MMP26Q9NRE1 261 aa17.29■□□□□ 0.36
LSM6-207ENST00000515311 TAS2R3Q9NYW6 316 aa17.29■□□□□ 0.36
LSM6-207ENST00000515311 OPN4Q9UHM6 478 aa17.29■□□□□ 0.36
LSM6-207ENST00000515311 INSIG2Q9Y5U4 225 aa17.29■□□□□ 0.36
LSM6-207ENST00000515311 KIAA2026Q5HYC2 2103 aa17.29■□□□□ 0.36
LSM6-207ENST00000515311 A0A0G2JMP0 313 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 A0A0X1KG70 313 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 SSX5O60225 188 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 RBP4P02753 201 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 FCGR3AP08637 254 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 ZNF728P0DKX0 622 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 FOSL1P15407 271 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 GZMHP20718 246 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 PTBP1P26599 531 aaKnown RBP eCLIP17.28■□□□□ 0.36
LSM6-207ENST00000515311 PRSS3P35030 304 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 GLP1RP43220 463 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 SRSF7Q16629 238 aaKnown RBP eCLIP17.28■□□□□ 0.36
LSM6-207ENST00000515311 C6orf183Q5T699 404 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 Q6ZPA2 131 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 SNX29P2Q8IUI4 249 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 OR4M2Q8NGB6 313 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 OR13A1Q8NGR1 328 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 CCDC107Q8WV48 283 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 NUDCD2Q8WVJ2 157 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 ZNF714Q96N38 554 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 ABHD1Q96SE0 405 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 TMUB1Q9BVT8 246 aa17.28■□□□□ 0.36
LSM6-207ENST00000515311 GAL3ST2Q9H3Q3 398 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms