RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 OR10G3Q8NGC4 313 aa6.35□□□□□ -1.39
CLIP1-205ENST00000514271 OR14K1Q8NGZ2 314 aa6.35□□□□□ -1.39
CLIP1-205ENST00000514271 TMEM56Q96MV1 263 aa6.35□□□□□ -1.39
CLIP1-205ENST00000514271 MICU1Q9BPX6 476 aa6.35□□□□□ -1.39
CLIP1-205ENST00000514271 TMEM56-RWDD3S4R434 201 aa6.35□□□□□ -1.39
CLIP1-205ENST00000514271 TRAV36DV7A0A075B6V5 113 aa6.35□□□□□ -1.39
CLIP1-205ENST00000514271 A0A1B0GU03 582 aa6.35□□□□□ -1.39
CLIP1-205ENST00000514271 SOCS1O15524 211 aa6.35□□□□□ -1.39
CLIP1-205ENST00000514271 CCL3P10147 92 aa6.35□□□□□ -1.39
CLIP1-205ENST00000514271 GNB3P16520 340 aa6.35□□□□□ -1.39
CLIP1-205ENST00000514271 GABRR1P24046 479 aa6.35□□□□□ -1.39
CLIP1-205ENST00000514271 DDTP30046 118 aa6.35□□□□□ -1.39
CLIP1-205ENST00000514271 ECI1P42126 302 aa6.35□□□□□ -1.39
CLIP1-205ENST00000514271 NPBWR2P48146 333 aa6.35□□□□□ -1.39
CLIP1-205ENST00000514271 OR10AD1Q8NGE0 317 aa6.35□□□□□ -1.39
CLIP1-205ENST00000514271 R3HDM4Q96D70 268 aa6.35□□□□□ -1.39
CLIP1-205ENST00000514271 MISP3Q96FF7 219 aa6.35□□□□□ -1.39
CLIP1-205ENST00000514271 LURAP1Q96LR2 239 aa6.35□□□□□ -1.39
CLIP1-205ENST00000514271 PACRGQ96M98 296 aaPredicted RBP6.35□□□□□ -1.39
CLIP1-205ENST00000514271 SH3BGRL3Q9H299 93 aa6.35□□□□□ -1.39
CLIP1-205ENST00000514271 EFNA2O43921 213 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 CLEC3BP05452 202 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 CELA3AP09093 270 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 RPS27P42677 84 aaKnown RBP6.34□□□□□ -1.39
CLIP1-205ENST00000514271 SOX2P48431 317 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 ZNF726P1Q15940 193 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 Q6ZRG5 221 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 Q8N976 141 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 CPEB3Q8NE35 698 aaKnown RBP6.34□□□□□ -1.39
CLIP1-205ENST00000514271 OR8S1Q8NH09 359 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 FAM57AQ8TBR7 257 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 GPR119Q8TDV5 335 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 ADOQ96SZ5 270 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 SULT4A1Q9BR01 284 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 PRDM14Q9GZV8 571 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 CALHM2Q9HA72 323 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 MCTS1Q9ULC4 181 aaKnown RBP6.34□□□□□ -1.39
CLIP1-205ENST00000514271 CHD3Q12873 2000 aaKnown RBP6.34□□□□□ -1.39
CLIP1-205ENST00000514271 WDR87Q6ZQQ6 2873 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 TRGV5A0A0B4J1U4 118 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 PRRG2O14669 202 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 F10P00742 488 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 OR5H8P0DN80 308 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 NQO2P16083 231 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 CD80P33681 288 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 ARL3P36405 182 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 CTXN1P60606 82 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 RND3P61587 244 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 NMSQ5H8A3 153 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 FBXL14Q8N1E6 418 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 ZNF664Q8N3J9 261 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 SLC22A24Q8N4F4 322 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 BOLLQ8N9W6 283 aaKnown RBP6.34□□□□□ -1.39
CLIP1-205ENST00000514271 INO80EQ8NBZ0 244 aaPredicted RBP6.34□□□□□ -1.39
CLIP1-205ENST00000514271 EMG1Q92979 244 aaKnown RBP6.34□□□□□ -1.39
CLIP1-205ENST00000514271 ISOC2Q96AB3 205 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 Q96M66 194 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 NDUFAF3Q9BU61 184 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 PLA2G3Q9NZ20 509 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 IL36GQ9NZH8 169 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 KIAA1456Q9P272 454 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 OR52A1Q9UKL2 312 aa6.34□□□□□ -1.39
CLIP1-205ENST00000514271 LRRC3CA6NJW4 275 aa6.34□□□□□ -1.4
CLIP1-205ENST00000514271 FAM171A2A8MVW0 826 aa6.34□□□□□ -1.4
CLIP1-205ENST00000514271 SS18L1O75177 396 aaPredicted RBP6.34□□□□□ -1.4
CLIP1-205ENST00000514271 YIF1AO95070 293 aa6.34□□□□□ -1.4
CLIP1-205ENST00000514271 TMEM50AO95807 157 aa6.34□□□□□ -1.4
CLIP1-205ENST00000514271 CD1BP29016 333 aa6.34□□□□□ -1.4
CLIP1-205ENST00000514271 IL2RGP31785 369 aa6.34□□□□□ -1.4
CLIP1-205ENST00000514271 FHITP49789 147 aa6.34□□□□□ -1.4
CLIP1-205ENST00000514271 ACKR1Q16570 336 aa6.34□□□□□ -1.4
CLIP1-205ENST00000514271 MIDNQ504T8 468 aa6.34□□□□□ -1.4
CLIP1-205ENST00000514271 SLC25A47Q6Q0C1 308 aa6.34□□□□□ -1.4
CLIP1-205ENST00000514271 SLC25A26Q70HW3 274 aa6.34□□□□□ -1.4
CLIP1-205ENST00000514271 TMEM144Q7Z5S9 345 aa6.34□□□□□ -1.4
CLIP1-205ENST00000514271 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.34□□□□□ -1.4
CLIP1-205ENST00000514271 TMEM251Q8N6I4 163 aa6.34□□□□□ -1.4
CLIP1-205ENST00000514271 OR10G8Q8NGN5 311 aa6.34□□□□□ -1.4
CLIP1-205ENST00000514271 GLMPQ8WWB7 406 aa6.34□□□□□ -1.4
CLIP1-205ENST00000514271 MBD3L1Q8WWY6 194 aa6.34□□□□□ -1.4
CLIP1-205ENST00000514271 MOB1AQ9H8S9 216 aa6.34□□□□□ -1.4
CLIP1-205ENST00000514271 PROK2Q9HC23 129 aa6.34□□□□□ -1.4
CLIP1-205ENST00000514271 SPTBN4Q9H254 2564 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 C5orf63A6NC05 138 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 B4DEV8 164 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 H0Y8G0 127 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 GPR137BO60478 399 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 MPZL1O95297 269 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 IGLV2-14P01704 120 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 P0C879 139 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 GDF1P27539 372 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 RPL12P30050 165 aaKnown RBP6.33□□□□□ -1.4
CLIP1-205ENST00000514271 PPP1CCP36873 323 aaKnown RBP6.33□□□□□ -1.4
CLIP1-205ENST00000514271 UBE2G2P60604 165 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 EIF4EBP1Q13541 118 aaPredicted RBP6.33□□□□□ -1.4
CLIP1-205ENST00000514271 IL13RA2Q14627 380 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 C4orf17Q53FE4 359 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 SPINK14Q6IE38 97 aa6.33□□□□□ -1.4
CLIP1-205ENST00000514271 DPPA2Q7Z7J5 298 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms