RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 KCTD9Q7L273 389 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 LRP11Q86VZ4 500 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 LDLRAD3Q86YD5 345 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 SGPP2Q8IWX5 399 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 CCDC71LQ8N9Z2 235 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 GRPEL2Q8TAA5 225 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 Q8TCH9 128 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 NEK7Q8TDX7 302 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 RDH5Q92781 318 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 SYT3Q9BQG1 590 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 SUCNR1Q9BXA5 334 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 CHIAQ9BZP6 476 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 NMES1Q9C002 83 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 TOLLIPQ9H0E2 274 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 NCOR1P1Q9H4R4 102 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 MSL2Q9HCI7 577 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 IL19Q9UHD0 177 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 KCNIP3Q9Y2W7 256 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 CADP27708 2225 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 IGSF10Q6WRI0 2623 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 TANC2Q9HCD6 1990 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 POLEQ07864 2286 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 SPTAN1Q13813 2472 aaKnown RBP7.05□□□□□ -1.28
RNF4-220ENST00000513578 SPTA1P02549 2419 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 TRGV8A0A0C4DH27 118 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 TMEM30CPA0ZSE6 113 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 ZSCAN5BA6NJL1 495 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 VSTM5A8MXK1 200 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 HS3ST1O14792 307 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 B3GALNT1O75752 331 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 SIX6O95475 246 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 LHBP01229 141 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 IFNA2P01563 188 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 SCTP09683 121 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 RPA2P15927 270 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 AADACP22760 399 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 CHRNB4P30926 498 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 SORDQ00796 357 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 IL15RAQ13261 267 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 HERPUD1Q15011 391 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 IGFBP7Q16270 282 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 IGSF11Q5DX21 431 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 PRAMEF6Q5VXH4 476 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 GSG1LQ6UXU4 331 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 C20orf204Q6ZNR8 217 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 H1FOOQ8IZA3 346 aaPredicted RBP7.05□□□□□ -1.28
RNF4-220ENST00000513578 BATF2Q8N1L9 274 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 OR2Z1Q8NG97 314 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 PLPPR1Q8TBJ4 325 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 FAM222BQ8WU58 562 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 RNASE6Q93091 150 aaKnown RBP7.05□□□□□ -1.28
RNF4-220ENST00000513578 ELMOD3Q96FG2 381 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 WDR89Q96FK6 387 aaPredicted RBP7.05□□□□□ -1.28
RNF4-220ENST00000513578 MEGF10Q96KG7 1140 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 MRPL37Q9BZE1 423 aaKnown RBP7.05□□□□□ -1.28
RNF4-220ENST00000513578 NAA60Q9H7X0 242 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 HEXA-AS1Q9H8Q6 139 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 C1orf123Q9NWV4 160 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 TAAR3PQ9P1P4 343 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 DUSP13Q9UII6 198 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 FZR1Q9UM11 496 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 MYO9AB2RTY4 2548 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 PIEZO2Q9H5I5 2752 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 DSCAML1Q8TD84 2053 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 IGF2RP11717 2491 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 MGAQ8IWI9 3026 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 DMXL2Q8TDJ6 3036 aa7.05□□□□□ -1.28
RNF4-220ENST00000513578 TENM4Q6N022 2769 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 LAMA5O15230 3695 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 DYSFO75923 2080 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 TRAV14DV4A0A0A6YYC5 116 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 PIGBOS1A0A0B4J2F0 54 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 IGKV1-6A0A0C4DH72 117 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 A6NLC8 198 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.04□□□□□ -1.28
RNF4-220ENST00000513578 SIRPB1O00241 398 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 LYL1P12980 280 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 PI3P19957 117 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 TNFSF4P23510 183 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 SERPINF1P36955 418 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 RBMXP38159 391 aaKnown RBP7.04□□□□□ -1.28
RNF4-220ENST00000513578 ZNF81P51508 661 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 PIGPP57054 158 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 BAMBIQ13145 260 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 ZNF345Q14585 488 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 TMEM187Q14656 261 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 MSMO1Q15800 293 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 ANKRD55Q3KP44 614 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 ABCA11PQ4W5N1 156 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 ESCO2Q56NI9 601 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 NCMAPQ5T1S8 102 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 C11orf87Q6NUJ2 197 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 TRAT1Q6PIZ9 186 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 ZNF826PQ6ZT77 177 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 NCCRP1Q6ZVX7 275 aaPredicted RBP7.04□□□□□ -1.28
RNF4-220ENST00000513578 WFDC8Q8IUA0 241 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 GCSAMQ8N6F7 178 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 LILRB4Q8NHJ6 448 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 PPP1R35Q8TAP8 253 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 CASTOR1Q8WTX7 329 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms