RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 IFNA14P01570 189 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 IGLV1-51P01701 117 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 CD24P25063 80 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 PSMB8P28062 276 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 CD34P28906 385 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 CASQ1P31415 396 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 SLC1A6P48664 564 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 MRPL19P49406 292 aaKnown RBP2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 CAMPP49913 170 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 TCTAP57738 103 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 LCN6P62502 163 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 GNG3P63215 75 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 KRR1Q13601 381 aaKnown RBP2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 EBI3Q14213 229 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF273Q14593 569 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 DEFB136Q30KP8 78 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 SMIM21Q3B7S5 101 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 FGD3Q5JSP0 725 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 TEX30Q5JUR7 227 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 WDR73Q6P4I2 378 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 DPY19L2P2Q6ZN68 376 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 ACP7Q6ZNF0 438 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 GDPD3Q7L5L3 318 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 TGIF2LXQ8IUE1 241 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 MSRB3Q8IXL7 192 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 IFT20Q8IY31 132 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 TIGD4Q8IY51 512 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 ABHD12Q8N2K0 398 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 CD177Q8N6Q3 437 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 C5orf56Q8N8D9 126 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF491Q8N8L2 437 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 OR4M1Q8NGD0 313 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 OR5A2Q8NGI9 324 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 MYOZ3Q8TDC0 251 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 LZICQ8WZA0 190 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 DCUN1D4Q92564 292 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 RPL3LQ92901 407 aaKnown RBP2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 TMEM106AQ96A25 262 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 ORAI1Q96D31 301 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 GPX7Q96SL4 187 aaPredicted RBP2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 SORT1Q99523 831 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 NABP2Q9BQ15 211 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 GFRA4Q9GZZ7 299 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 OR51I2Q9H344 312 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 TUBA4BQ9H853 241 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 VIPAS39Q9H9C1 493 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 ELL3Q9HB65 397 aaPredicted RBP2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 ISYNA1Q9NPH2 558 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 SLC25A37Q9NYZ2 338 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 VAPAQ9P0L0 249 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 ACTR3BQ9P1U1 418 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 FBXL17Q9UF56 701 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 CD300AQ9UGN4 299 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 MRM2Q9UI43 246 aaKnown RBP2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 PYCARDQ9ULZ3 195 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 VSIG4Q9Y279 399 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 TMEM5Q9Y2B1 443 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 RHBDD3Q9Y3P4 386 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 LINC00312Q9Y6C7 94 aa2.77□□□□□ -1.97
PDLIM5-218ENST00000513341 TRAV27A0A087WT01 109 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 IGKV3D-20A0A0C4DH25 116 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 hCG_38984A0A1B0GV85 526 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 OR5B21A6NL26 309 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF850A8MQ14 1090 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF732B4DXR9 585 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 H3BSH0 61 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 DCTN6O00399 190 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 UBDO15205 165 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 IDH3BO43837 385 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 TYROBPO43914 113 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 MPZL2O60487 215 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 RENP00797 406 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 SERPINA1P01009 418 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 IGF1P05019 195 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 TROVE2P10155 538 aaKnown RBP eCLIP2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 FASP25445 335 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 ERP29P30040 261 aaKnown RBP2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 GMFBP60983 142 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 GRB2P62993 217 aaKnown RBP2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 PRDX4Q13162 271 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 STX3Q13277 289 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 KIAA0141Q14154 515 aaPredicted RBP2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 TRAM2Q15035 370 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 TAF13Q15543 124 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 MEP1BQ16820 701 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 CEACAM21Q3KPI0 293 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 OTPQ5XKR4 325 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 HEPN1Q6WQI6 88 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 MBOAT2Q6ZWT7 520 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 KRTAP5-5Q701N2 237 aaPredicted RBP2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 ZDHHC21Q8IVQ6 265 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 NRMQ8IXM6 262 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 POC1AQ8NBT0 407 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF485Q8NCK3 441 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 MNS1Q8NEH6 495 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 OR8H1Q8NGG4 311 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 AQP3Q92482 292 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 PIGCQ92535 297 aa2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 DLX4Q92988 240 aaPredicted RBP2.76□□□□□ -1.97
PDLIM5-218ENST00000513341 TAMM41Q96BW9 452 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms