RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 NDUFB11Q9NX14 153 aa0.12□□□□□ -2.39
PDGFC-208ENST00000512711 ANXA10Q9UJ72 324 aa0.12□□□□□ -2.39
PDGFC-208ENST00000512711 TMCC3Q9ULS5 477 aa0.12□□□□□ -2.39
PDGFC-208ENST00000512711 PSMD13Q9UNM6 376 aa0.12□□□□□ -2.39
PDGFC-208ENST00000512711 TFR2Q9UP52 801 aa0.12□□□□□ -2.39
PDGFC-208ENST00000512711 AP3M1Q9Y2T2 418 aa0.12□□□□□ -2.39
PDGFC-208ENST00000512711 MRPS16Q9Y3D3 137 aaKnown RBP0.12□□□□□ -2.39
PDGFC-208ENST00000512711 PUS1Q9Y606 427 aaKnown RBP eCLIP0.12□□□□□ -2.39
PDGFC-208ENST00000512711 APCP25054 2843 aa0.12□□□□□ -2.39
PDGFC-208ENST00000512711 NCOA6Q14686 2063 aaPredicted RBP0.12□□□□□ -2.39
PDGFC-208ENST00000512711 NUMA1Q14980 2115 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 POLR3AO14802 1390 aaPredicted RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 MUC2Q02817 5179 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 IGKV2D-26A0A0A0MRZ7 120 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 TRAV8-3A0A0A6YYJ7 113 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 IGKV3D-7A0A0C4DH55 119 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 IGKV3OR2-268A0A0C4DH90 116 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 TRBV6-5A0A0K0K1A5 114 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 CTAGE15A4D2H0 777 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 RFPL4AA6NLU0 287 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 CENPXA8MT69 81 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 A8MUN3 132 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 C9J4A7 227 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 RFPL4AL1F8VTS6 287 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 K7EQS6 105 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 ZNF701M0R085 212 aaPredicted RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 M0R1B8 84 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 ZW10O43264 779 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 ENSAO43768 121 aaKnown RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 SPOPO43791 374 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 TRAPPC6AO75865 159 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 ZNF705DP0CH99 300 aaPredicted RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 ZNF705BP0CI00 300 aaPredicted RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 LIPCP11150 499 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 PRKACAP17612 351 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 RPS5P46782 204 aaKnown RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 RPL14P50914 215 aaKnown RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 PLTPP55058 493 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 RPL31P62899 125 aaKnown RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 CTAG1AP78358 180 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 SLC35B1P78383 322 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 LCN2P80188 198 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 ERHP84090 104 aaKnown RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 SLC38A11Q08AI6 406 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 C2orf80Q0P641 193 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 PLCXD2Q0VAA5 305 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 TOMM34Q15785 309 aaPredicted RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 ZNF791Q3KP31 576 aaPredicted RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 CLEC12AQ5QGZ9 265 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 TIMM23BQ5SRD1 257 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 FAM201AQ5SY85 155 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 DUPD1Q68J44 220 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 GLYATQ6IB77 296 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 SDIM1Q6ZPB5 146 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 C2orf91Q6ZV80 131 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 SSX7Q7RTT5 188 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 SETD3Q86TU7 594 aaPredicted RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 CTAGE6Q86UF2 777 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 LRRC28Q86X40 367 aaPredicted RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 SLC35F6Q8N357 371 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 ATPAF2Q8N5M1 289 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 KRTCAP2Q8N6L1 136 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 FAM184AQ8NB25 1140 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 OR5T3Q8NGG3 340 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 CLHC1Q8NHS4 586 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 CD200R1Q8TD46 325 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 C16orf78Q8WTQ4 265 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 CASTOR1Q8WTX7 329 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 TSEN15Q8WW01 171 aaKnown RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 CCL17Q92583 94 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 TFGQ92734 400 aaPredicted RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 TMBIM1Q969X1 311 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 TMIGD2Q96BF3 282 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 ZNF514Q96K75 400 aaPredicted RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 MBOAT7Q96N66 472 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 MGLLQ99685 303 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 APOL4Q9BPW4 351 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 Q9BRP9 147 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 CYSTM1Q9H1C7 97 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 WDR55Q9H6Y2 383 aaPredicted RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 MRPS30Q9NP92 439 aaKnown RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 BABAM2Q9NXR7 383 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 DNAJC27Q9NZQ0 273 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 PEF1Q9UBV8 284 aaKnown RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 POMPQ9Y244 141 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 KLK5Q9Y337 293 aaPredicted RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 WASHC3Q9Y3C0 194 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 KMT2CQ8NEZ4 4911 aaKnown RBP0.11□□□□□ -2.39
PDGFC-208ENST00000512711 MUC12Q9UKN1 5478 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 SSPOA2VEC9 5147 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 MAST4O15021 2626 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 ADAMTSL3P82987 1691 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 WDR19Q8NEZ3 1342 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 NRCAMQ92823 1304 aa0.11□□□□□ -2.39
PDGFC-208ENST00000512711 SBNO1A3KN83 1393 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 TRAV8-7A0A075B6U6 113 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 SYNJ2BP-COX16A0A087WUM0 186 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 IGHV3-15A0A0B4J1V0 119 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 IGKV1-12A0A0C4DH73 117 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 A0A1W2PRF3 423 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms