RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 TMEM225BP0DP42 221 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 CD24P25063 80 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 GDNFP39905 211 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 MTNR1BP49286 362 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 SLC35B1P78383 322 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 CD69Q07108 199 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 SCN1BQ07699 218 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 MADCAM1Q13477 382 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 C17orf58Q2M2W7 97 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 ZNF691Q5VV52 312 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 ELP2Q6IA86 826 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 MRPL41Q8IXM3 137 aaKnown RBP9.97□□□□□ -0.81
VEGFA-216ENST00000512683 OR51A2Q8NGJ7 313 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 OR51T1Q8NGJ9 327 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 CNIH3Q8TBE1 160 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 COQ2Q96H96 371 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 GON7Q9BXV9 100 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 ZNF286AQ9HBT8 521 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 DHDHQ9UQ10 334 aa9.97□□□□□ -0.81
VEGFA-216ENST00000512683 SIRT4Q9Y6E7 314 aaPredicted RBP9.97□□□□□ -0.81
VEGFA-216ENST00000512683 NPIPB11E5RHQ5 1161 aa9.96□□□□□ -0.82
VEGFA-216ENST00000512683 J3QR06 171 aa9.96□□□□□ -0.82
VEGFA-216ENST00000512683 IGHG2P01859 326 aa9.96□□□□□ -0.82
VEGFA-216ENST00000512683 GZMHP20718 246 aa9.96□□□□□ -0.82
VEGFA-216ENST00000512683 OR3A4PP47883 348 aa9.96□□□□□ -0.82
VEGFA-216ENST00000512683 RPL23AP62750 156 aaKnown RBP9.96□□□□□ -0.82
VEGFA-216ENST00000512683 ZSCAN26Q16670 478 aa9.96□□□□□ -0.82
VEGFA-216ENST00000512683 CCDC58Q4VC31 144 aa9.96□□□□□ -0.82
VEGFA-216ENST00000512683 KHDC1LQ5JSQ8 128 aa9.96□□□□□ -0.82
VEGFA-216ENST00000512683 C9orf152Q5JTZ5 239 aa9.96□□□□□ -0.82
VEGFA-216ENST00000512683 OR2G6Q5TZ20 316 aa9.96□□□□□ -0.82
VEGFA-216ENST00000512683 RPL22L1Q6P5R6 122 aaKnown RBP9.96□□□□□ -0.82
VEGFA-216ENST00000512683 ZNF555Q8NEP9 628 aa9.96□□□□□ -0.82
VEGFA-216ENST00000512683 PXT1Q8NFP0 134 aa9.96□□□□□ -0.82
VEGFA-216ENST00000512683 TSEN15Q8WW01 171 aaKnown RBP9.96□□□□□ -0.82
VEGFA-216ENST00000512683 PPIL3Q9H2H8 161 aaKnown RBP9.96□□□□□ -0.82
VEGFA-216ENST00000512683 KMT2CQ8NEZ4 4911 aaKnown RBP9.95□□□□□ -0.82
VEGFA-216ENST00000512683 CCRL2O00421 344 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 GABRPO00591 440 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 OGG1O15527 345 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 LALBAP00709 142 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 RAB3AP20336 220 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 DCKP27707 260 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 SOX2P48431 317 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 ADARB1P78563 741 aaKnown RBP9.95□□□□□ -0.82
VEGFA-216ENST00000512683 DGCR2P98153 550 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 EBI3Q14213 229 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 LRRC36Q1X8D7 754 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 UTF1Q5T230 341 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 ASCL4Q6XD76 172 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 OR2W3Q7Z3T1 314 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 FOXRED2Q8IWF2 684 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 ZNF485Q8NCK3 441 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 Q8NFD4 153 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 TOMM40LQ969M1 308 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 KIRREL1Q96J84 757 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 P2RX4Q99571 388 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 TAS2R4Q9NYW5 299 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 IDI2-AS1Q9NZ38 188 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 CLEC2DQ9UHP7 191 aa9.95□□□□□ -0.82
VEGFA-216ENST00000512683 TRAV24A0A0B4J272 114 aa9.94□□□□□ -0.82
VEGFA-216ENST00000512683 SERPINE3A8MV23 424 aa9.94□□□□□ -0.82
VEGFA-216ENST00000512683 H0YHG0 523 aa9.94□□□□□ -0.82
VEGFA-216ENST00000512683 IL1AP01583 271 aa9.94□□□□□ -0.82
VEGFA-216ENST00000512683 SNRNP70P08621 437 aaKnown RBP9.94□□□□□ -0.82
VEGFA-216ENST00000512683 TMEM11P17152 192 aa9.94□□□□□ -0.82
VEGFA-216ENST00000512683 NFYBP25208 207 aa9.94□□□□□ -0.82
VEGFA-216ENST00000512683 RBM39Q14498 530 aaKnown RBP9.94□□□□□ -0.82
VEGFA-216ENST00000512683 IL13RA2Q14627 380 aa9.94□□□□□ -0.82
VEGFA-216ENST00000512683 ATXN7L3Q14CW9 347 aaPredicted RBP9.94□□□□□ -0.82
VEGFA-216ENST00000512683 PNLIPRP3Q17RR3 467 aa9.94□□□□□ -0.82
VEGFA-216ENST00000512683 TEX38Q6PEX7 206 aa9.94□□□□□ -0.82
VEGFA-216ENST00000512683 ETV3LQ6ZN32 361 aa9.94□□□□□ -0.82
VEGFA-216ENST00000512683 SATL1Q86VE3 508 aa9.94□□□□□ -0.82
VEGFA-216ENST00000512683 ZNF695Q8IW36 515 aa9.94□□□□□ -0.82
VEGFA-216ENST00000512683 C5orf56Q8N8D9 126 aa9.94□□□□□ -0.82
VEGFA-216ENST00000512683 C8orf31Q8N9H6 132 aa9.94□□□□□ -0.82
VEGFA-216ENST00000512683 GPR148Q8TDV2 347 aa9.94□□□□□ -0.82
VEGFA-216ENST00000512683 TMEM106AQ96A25 262 aa9.94□□□□□ -0.82
VEGFA-216ENST00000512683 ING3Q9NXR8 418 aa9.94□□□□□ -0.82
VEGFA-216ENST00000512683 CALYQ9NYX4 217 aa9.94□□□□□ -0.82
VEGFA-216ENST00000512683 DIMT1Q9UNQ2 313 aaKnown RBP9.94□□□□□ -0.82
VEGFA-216ENST00000512683 MEIKINA0A087WXM9 373 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 FAM172BPA6NC97 362 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 H0YJX3 145 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 MAGEB3O15480 346 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 GAPDHP04406 335 aaKnown RBP9.93□□□□□ -0.82
VEGFA-216ENST00000512683 HOXD3P31249 432 aaPredicted RBP9.93□□□□□ -0.82
VEGFA-216ENST00000512683 ZNF816Q0VGE8 651 aaPredicted RBP9.93□□□□□ -0.82
VEGFA-216ENST00000512683 Q3ZCU0 254 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 TTC23Q5W5X9 447 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 LAIR2Q6ISS4 152 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 C10orf99Q6UWK7 81 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 TMPRSS11AQ6ZMR5 421 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 SLC35E3Q7Z769 313 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 ZNF329Q86UD4 541 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 TGIF2LXQ8IUE1 241 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 DRAM1Q8N682 238 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 PACRGLQ8N7B6 248 aa9.93□□□□□ -0.82
VEGFA-216ENST00000512683 OR8H1Q8NGG4 311 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms