RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 C6orf201Q7Z4U5 140 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 GAPTQ8N292 157 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 IGHV5-10-1A0A0J9YXX1 117 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 PSG9Q00887 426 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 RAB32Q13637 225 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 SLC17A1Q14916 467 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 MRPL24Q96A35 216 aaKnown RBP7.85□□□□□ -1.15
VCAN-208ENST00000512590 ZNF778Q96MU6 729 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 DMRTA2Q96SC8 542 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 NRN1Q9NPD7 142 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 OR51B2Q9Y5P1 312 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 PPLO60437 1756 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 TRAV9-2A0A087WT02 112 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 A8MWL6 223 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 H3BRM9 83 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 NAT2P11245 290 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 SPI1P17947 270 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 PSG5Q15238 335 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 ALKAL2Q6UX46 152 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 COLCA1Q6ZS62 124 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 Q71RC1 249 aaPredicted RBP7.85□□□□□ -1.15
VCAN-208ENST00000512590 POC1AQ8NBT0 407 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 OR4C5Q8NGB2 326 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 TBX15Q96SF7 602 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 SPAG8Q99932 426 aaPredicted RBP7.85□□□□□ -1.15
VCAN-208ENST00000512590 UQCC2Q9BRT2 126 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 SFXN3Q9BWM7 321 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 NXF2Q9GZY0 626 aaKnown RBP7.85□□□□□ -1.15
VCAN-208ENST00000512590 CST9LQ9H4G1 147 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 TMEM131LA2VDJ0 1609 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 RPL12P30050 165 aaKnown RBP7.85□□□□□ -1.15
VCAN-208ENST00000512590 P2RY6Q15077 328 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 C10orf128Q5T292 105 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 FBXW9Q5XUX1 488 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 SLC7A5P1Q8MH63 180 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 OR2C3Q8N628 320 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 ZNF707Q96C28 371 aaPredicted RBP7.85□□□□□ -1.15
VCAN-208ENST00000512590 SIGLEC12Q96PQ1 595 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 SIGLEC11Q96RL6 698 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 WIPI2Q9Y4P8 454 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 TRAV30A0A087WSZ9 112 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 HYPMO75409 117 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 PRR35P0CG20 571 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 MMP16P51512 607 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 COL10A1Q03692 680 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 FAM71E1Q6IPT2 247 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 OR2T10Q8NGZ9 312 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 NIPSNAP1Q9BPW8 284 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 R3HDMLQ9H3Y0 253 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 TUBD1Q9UJT1 453 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 IL4P05112 153 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 PATE4P0C8F1 98 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 HIST1H1CP16403 213 aaKnown RBP7.84□□□□□ -1.15
VCAN-208ENST00000512590 CD68P34810 354 aaPredicted RBP7.84□□□□□ -1.15
VCAN-208ENST00000512590 VRK3Q8IV63 474 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 C20orf196Q8IYI0 205 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 KIR2DL4Q99706 377 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 NKX6-2Q9C056 277 aaPredicted RBP7.84□□□□□ -1.15
VCAN-208ENST00000512590 IGHA1P01876 353 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 IGHA2P01877 340 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 COL5A1-AS1Q5SY13 56 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 PNKDQ8N490 385 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 LILRA3Q8N6C8 439 aaPredicted RBP7.84□□□□□ -1.15
VCAN-208ENST00000512590 ABHD14BQ96IU4 210 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 EXOGQ9Y2C4 368 aaKnown RBP7.84□□□□□ -1.15
VCAN-208ENST00000512590 KCNK7Q9Y2U2 307 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 C22orf46C9J442 243 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 SMLR1H3BR10 107 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 TTRP02766 147 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 SOD3P08294 240 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 PI3P19957 117 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 ANOS1P23352 680 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 APOBEC3AP31941 199 aaPredicted RBP7.84□□□□□ -1.15
VCAN-208ENST00000512590 OLIG3Q7RTU3 272 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 OR2D3Q8NGH3 330 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 VAMP8Q9BV40 100 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 WSB1Q9Y6I7 421 aa7.84□□□□□ -1.15
VCAN-208ENST00000512590 SLIT3O75094 1523 aa7.84□□□□□ -1.16
VCAN-208ENST00000512590 A0A087WV62 115 aa7.84□□□□□ -1.16
VCAN-208ENST00000512590 TRAV39A0A0B4J263 110 aa7.84□□□□□ -1.16
VCAN-208ENST00000512590 OR2W5A6NFC9 320 aa7.84□□□□□ -1.16
VCAN-208ENST00000512590 PGA4P0DJD7 388 aa7.84□□□□□ -1.16
VCAN-208ENST00000512590 PGA3P0DJD8 388 aa7.84□□□□□ -1.16
VCAN-208ENST00000512590 PGA5P0DJD9 388 aa7.84□□□□□ -1.16
VCAN-208ENST00000512590 S100A11P31949 105 aa7.84□□□□□ -1.16
VCAN-208ENST00000512590 IGSF11Q5DX21 431 aa7.84□□□□□ -1.16
VCAN-208ENST00000512590 ZNF324BQ6AW86 544 aaPredicted RBP7.84□□□□□ -1.16
VCAN-208ENST00000512590 WDR74Q6RFH5 385 aaPredicted RBP7.84□□□□□ -1.16
VCAN-208ENST00000512590 CEACAM5P06731 702 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 FCGR3AP08637 254 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 SLC6A1P30531 599 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 OTPQ5XKR4 325 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 TMEM92Q6UXU6 159 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 OVCH2Q7RTZ1 564 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 DDA1Q9BW61 102 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 TLNRD1Q9H1K6 362 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 GPR27Q9NS67 375 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 COL16A1Q07092 1604 aaPredicted RBP7.83□□□□□ -1.16
VCAN-208ENST00000512590 A0A1W2PR48 441 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 FCN1O00602 326 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms