RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 MARC2Q969Z3 335 aa4.3□□□□□ -1.72
GYPB-212ENST00000511198 SMIM19Q96E16 107 aa4.3□□□□□ -1.72
GYPB-212ENST00000511198 PHYHIPLQ96FC7 376 aa4.3□□□□□ -1.72
GYPB-212ENST00000511198 SLC41A3Q96GZ6 507 aa4.3□□□□□ -1.72
GYPB-212ENST00000511198 PGLYRP3Q96LB9 341 aa4.3□□□□□ -1.72
GYPB-212ENST00000511198 CXorf58Q96LI9 332 aa4.3□□□□□ -1.72
GYPB-212ENST00000511198 C17orf77Q96MU5 243 aa4.3□□□□□ -1.72
GYPB-212ENST00000511198 AMDHD1Q96NU7 426 aa4.3□□□□□ -1.72
GYPB-212ENST00000511198 PCGF1Q9BSM1 259 aa4.3□□□□□ -1.72
GYPB-212ENST00000511198 SCPEP1Q9HB40 452 aa4.3□□□□□ -1.72
GYPB-212ENST00000511198 GLRX2Q9NS18 164 aa4.3□□□□□ -1.72
GYPB-212ENST00000511198 CA10Q9NS85 328 aa4.3□□□□□ -1.72
GYPB-212ENST00000511198 ZCCHC3Q9NUD5 404 aaKnown RBP4.3□□□□□ -1.72
GYPB-212ENST00000511198 TAS2R8Q9NYW2 309 aa4.3□□□□□ -1.72
GYPB-212ENST00000511198 PURGQ9UJV8 347 aaKnown RBP4.3□□□□□ -1.72
GYPB-212ENST00000511198 COPS3Q9UNS2 423 aa4.3□□□□□ -1.72
GYPB-212ENST00000511198 IGLV5-45A0A087WSX0 123 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 A0A0A6YYD5 115 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 A0A0D9SG52 128 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 A0A1B0GVY2 172 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 ZNF98A6NK75 572 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 RIIAD1A6NNX1 92 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 BHLHE40O14503 412 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 ARPC1BO15143 372 aaKnown RBP4.29□□□□□ -1.72
GYPB-212ENST00000511198 SYNGR3O43761 229 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 FMO6PO60774 539 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 IFNGP01579 166 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 IFNA4P05014 189 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 SBK2P0C263 348 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 PATE4P0C8F1 98 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 PRG2P13727 222 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 MGMTP16455 207 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 ZNF3P17036 446 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 ATF1P18846 271 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 ACHEP22303 614 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 GDI2P50395 445 aaKnown RBP4.29□□□□□ -1.72
GYPB-212ENST00000511198 SKP1P63208 163 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 SSBP1Q04837 148 aaKnown RBP4.29□□□□□ -1.72
GYPB-212ENST00000511198 SLC3A1Q07837 685 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 FUT5Q11128 374 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 STX4Q12846 297 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 ZNF154Q13106 437 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 ZNF345Q14585 488 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 INSL4Q14641 139 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 CDK5R1Q15078 307 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 CXorf66Q5JRM2 361 aaPredicted RBP4.29□□□□□ -1.72
GYPB-212ENST00000511198 CLEC12AQ5QGZ9 265 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 AVPI1Q5T686 147 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 LPCAT3Q6P1A2 487 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 PLBD1Q6P4A8 553 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 RPL22L1Q6P5R6 122 aaKnown RBP4.29□□□□□ -1.72
GYPB-212ENST00000511198 LRRN1Q6UXK5 716 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 RANBP3LQ86VV4 465 aaPredicted RBP4.29□□□□□ -1.72
GYPB-212ENST00000511198 C17orf64Q86WR6 236 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 TUSC5Q8IXB3 177 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 ZNF433Q8N7K0 673 aaPredicted RBP4.29□□□□□ -1.72
GYPB-212ENST00000511198 TMEM99Q8N816 258 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 WDR31Q8NA23 367 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 BBS1Q8NFJ9 593 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 PXT1Q8NFP0 134 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 BEST4Q8NFU0 473 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 OR10H4Q8NGA5 316 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 COQ8AQ8NI60 647 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 ZNF671Q8TAW3 534 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 NT5CQ8TCD5 201 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 LGALS14Q8TCE9 139 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 RPS4Y2Q8TD47 263 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 THEM6Q8WUY1 208 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 FCAMRQ8WWV6 532 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 RDH5Q92781 318 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 EXOSC8Q96B26 276 aaKnown RBP4.29□□□□□ -1.72
GYPB-212ENST00000511198 MRPS24Q96EL2 167 aaKnown RBP4.29□□□□□ -1.72
GYPB-212ENST00000511198 C4orf36Q96KX1 117 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 WFDC6Q9BQY6 131 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 SLC19A3Q9BZV2 496 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 NKX6-2Q9C056 277 aaPredicted RBP4.29□□□□□ -1.72
GYPB-212ENST00000511198 SLC38A1Q9H2H9 487 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 OR52D1Q9H346 318 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 GLIPR2Q9H4G4 154 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 AUNIPQ9H7T9 357 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 ISG20L2Q9H9L3 353 aaKnown RBP4.29□□□□□ -1.72
GYPB-212ENST00000511198 NOX3Q9HBY0 568 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 SLC35C2Q9NQQ7 365 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 CMC2Q9NRP2 79 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 MRPL15Q9P015 296 aaKnown RBP4.29□□□□□ -1.72
GYPB-212ENST00000511198 ZNF443Q9Y2A4 671 aaPredicted RBP4.29□□□□□ -1.72
GYPB-212ENST00000511198 SLC35A3Q9Y2D2 325 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 SIGLEC9Q9Y336 463 aa4.29□□□□□ -1.72
GYPB-212ENST00000511198 DNAH6Q9C0G6 4158 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 PPIAL4EA0A075B759 164 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 PPIAL4CA0A0B4J2A2 164 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 A0A0G2JN53 185 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 RAB19A4D1S5 217 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 RFPL4AA6NLU0 287 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 DUXAA6NLW8 204 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 CPSF4LA6NMK7 179 aaKnown RBP4.28□□□□□ -1.72
GYPB-212ENST00000511198 ANXA2P2A6NMY6 339 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 FAM90A26D6RGX4 464 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 PPIAL4DF5H284 164 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms