RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 PSG11Q9UQ72 335 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 MOB4Q9Y3A3 225 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 HSPE1-MOB4S4R3N1 261 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 TRAV39A0A0B4J263 110 aa12.24□□□□□ -0.45
TPM3-219ENST00000509409 MPIG6BO95866 241 aa12.24□□□□□ -0.45
TPM3-219ENST00000509409 IL1AP01583 271 aa12.24□□□□□ -0.45
TPM3-219ENST00000509409 CSTBP04080 98 aaKnown RBP12.24□□□□□ -0.45
TPM3-219ENST00000509409 TMEM11P17152 192 aa12.24□□□□□ -0.45
TPM3-219ENST00000509409 KCNJ3P48549 501 aa12.24□□□□□ -0.45
TPM3-219ENST00000509409 PPP3R1P63098 170 aa12.24□□□□□ -0.45
TPM3-219ENST00000509409 SLC35A2P78381 396 aa12.24□□□□□ -0.45
TPM3-219ENST00000509409 MADCAM1Q13477 382 aa12.24□□□□□ -0.45
TPM3-219ENST00000509409 RPL22L1Q6P5R6 122 aaKnown RBP12.24□□□□□ -0.45
TPM3-219ENST00000509409 TMPRSS11AQ6ZMR5 421 aa12.24□□□□□ -0.45
TPM3-219ENST00000509409 DRAM1Q8N682 238 aa12.24□□□□□ -0.45
TPM3-219ENST00000509409 ZNF555Q8NEP9 628 aa12.24□□□□□ -0.45
TPM3-219ENST00000509409 OR10X1Q8NGY0 326 aa12.24□□□□□ -0.45
TPM3-219ENST00000509409 OR56B4Q8NH76 319 aa12.24□□□□□ -0.45
TPM3-219ENST00000509409 PLPPR1Q8TBJ4 325 aa12.24□□□□□ -0.45
TPM3-219ENST00000509409 DNAH3Q8TD57 4116 aa12.24□□□□□ -0.45
TPM3-219ENST00000509409 S100A14Q9HCY8 104 aa12.24□□□□□ -0.45
TPM3-219ENST00000509409 MRPS18AQ9NVS2 196 aaKnown RBP12.24□□□□□ -0.45
TPM3-219ENST00000509409 ST3GAL6Q9Y274 331 aa12.24□□□□□ -0.45
TPM3-219ENST00000509409 PSMB11A5LHX3 300 aa12.23□□□□□ -0.45
TPM3-219ENST00000509409 FAM90A18PA6NE21 464 aa12.23□□□□□ -0.45
TPM3-219ENST00000509409 FAM90A16PA6NEW6 464 aa12.23□□□□□ -0.45
TPM3-219ENST00000509409 FAM90A20PA6NIJ5 464 aa12.23□□□□□ -0.45
TPM3-219ENST00000509409 FAM90A9PA6NNJ1 464 aa12.23□□□□□ -0.45
TPM3-219ENST00000509409 FAM90A12PA8MX19 464 aa12.23□□□□□ -0.45
TPM3-219ENST00000509409 FAM90A5PA8MXJ8 464 aa12.23□□□□□ -0.45
TPM3-219ENST00000509409 CDRT1O95170 752 aa12.23□□□□□ -0.45
TPM3-219ENST00000509409 BAG2O95816 211 aa12.23□□□□□ -0.45
TPM3-219ENST00000509409 FAM90A15PP0C7V4 464 aa12.23□□□□□ -0.45
TPM3-219ENST00000509409 FAM90A13PP0C7W8 464 aa12.23□□□□□ -0.45
TPM3-219ENST00000509409 FAM90A14PP0C7W9 464 aa12.23□□□□□ -0.45
TPM3-219ENST00000509409 FAM90A24PP0C7X0 464 aa12.23□□□□□ -0.45
TPM3-219ENST00000509409 RSBN1Q5VWQ0 802 aaPredicted RBP12.23□□□□□ -0.45
TPM3-219ENST00000509409 OSR2Q8N2R0 312 aa12.23□□□□□ -0.45
TPM3-219ENST00000509409 SUMF2Q8NBJ7 301 aa12.23□□□□□ -0.45
TPM3-219ENST00000509409 DPCDQ9BVM2 203 aaPredicted RBP12.23□□□□□ -0.45
TPM3-219ENST00000509409 A0A1W2PPE3 182 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 OR7C1O76099 320 aaPredicted RBP12.22□□□□□ -0.45
TPM3-219ENST00000509409 LIMS3P0CW19 117 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 LIMS4P0CW20 117 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 GZMHP20718 246 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 SSTR5P35346 364 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 ZNF93P35789 620 aaPredicted RBP12.22□□□□□ -0.45
TPM3-219ENST00000509409 RAB7AP51149 207 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 DIAPH2-AS1Q14236 149 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 SMN1Q16637 294 aaKnown RBP12.22□□□□□ -0.45
TPM3-219ENST00000509409 CCDC58Q4VC31 144 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 DEFB121Q5J5C9 76 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 ATAD3CQ5T2N8 411 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 DDI2Q5TDH0 399 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 ZNF529Q6P280 563 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 ASCL4Q6XD76 172 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 SLC16A12Q6ZSM3 486 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 MOB3BQ86TA1 216 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 ZNF329Q86UD4 541 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 OR10A7Q8NGE5 316 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 OR52N1Q8NH53 320 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 APH1BQ8WW43 257 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 RGP1Q92546 391 aaPredicted RBP12.22□□□□□ -0.45
TPM3-219ENST00000509409 TMEM106AQ96A25 262 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 RCC1LQ96I51 464 aaKnown RBP12.22□□□□□ -0.45
TPM3-219ENST00000509409 FGF20Q9NP95 211 aaPredicted RBP12.22□□□□□ -0.45
TPM3-219ENST00000509409 TMEM138Q9NPI0 162 aa12.22□□□□□ -0.45
TPM3-219ENST00000509409 SERPINE3A8MV23 424 aa12.21□□□□□ -0.45
TPM3-219ENST00000509409 NPIPB11E5RHQ5 1161 aa12.21□□□□□ -0.45
TPM3-219ENST00000509409 IGKV1D-33P01593 117 aa12.21□□□□□ -0.45
TPM3-219ENST00000509409 IGKV1-33P01594 117 aa12.21□□□□□ -0.45
TPM3-219ENST00000509409 SERPINA2P20848 420 aa12.21□□□□□ -0.45
TPM3-219ENST00000509409 DCKP27707 260 aa12.21□□□□□ -0.45
TPM3-219ENST00000509409 BDKRB2P30411 391 aa12.21□□□□□ -0.45
TPM3-219ENST00000509409 ETV1P50549 477 aa12.21□□□□□ -0.45
TPM3-219ENST00000509409 OR2G6Q5TZ20 316 aa12.21□□□□□ -0.45
TPM3-219ENST00000509409 OR8H3Q8N146 312 aa12.21□□□□□ -0.45
TPM3-219ENST00000509409 PQLC1Q8N2U9 271 aa12.21□□□□□ -0.45
TPM3-219ENST00000509409 Q8NFD4 153 aa12.21□□□□□ -0.45
TPM3-219ENST00000509409 NEK7Q8TDX7 302 aa12.21□□□□□ -0.45
TPM3-219ENST00000509409 CCDC107Q8WV48 283 aa12.21□□□□□ -0.45
TPM3-219ENST00000509409 ARL11Q969Q4 196 aa12.21□□□□□ -0.45
TPM3-219ENST00000509409 NOL4LQ96MY1 436 aaPredicted RBP12.21□□□□□ -0.45
TPM3-219ENST00000509409 LINC00574Q9H8X3 128 aa12.21□□□□□ -0.45
TPM3-219ENST00000509409 PAK1IP1Q9NWT1 392 aaPredicted RBP12.21□□□□□ -0.45
TPM3-219ENST00000509409 CHCHD3Q9NX63 227 aaKnown RBP12.21□□□□□ -0.45
TPM3-219ENST00000509409 BABAM2Q9NXR7 383 aa12.21□□□□□ -0.45
TPM3-219ENST00000509409 ZNF281Q9Y2X9 895 aa12.21□□□□□ -0.45
TPM3-219ENST00000509409 A0A1W2PPI3 338 aa12.2□□□□□ -0.46
TPM3-219ENST00000509409 TMEM30CPA0ZSE6 113 aa12.2□□□□□ -0.46
TPM3-219ENST00000509409 CCRL2O00421 344 aa12.2□□□□□ -0.46
TPM3-219ENST00000509409 GEMIN2O14893 280 aaKnown RBP12.2□□□□□ -0.46
TPM3-219ENST00000509409 DUS4LO95620 317 aaKnown RBP12.2□□□□□ -0.46
TPM3-219ENST00000509409 GAPDHP04406 335 aaKnown RBP12.2□□□□□ -0.46
TPM3-219ENST00000509409 MYL12AP19105 171 aa12.2□□□□□ -0.46
TPM3-219ENST00000509409 XAF1Q6GPH4 301 aa12.2□□□□□ -0.46
TPM3-219ENST00000509409 C5orf56Q8N8D9 126 aa12.2□□□□□ -0.46
TPM3-219ENST00000509409 OR51D1Q8NGF3 324 aa12.2□□□□□ -0.46
TPM3-219ENST00000509409 CHPT1Q8WUD6 406 aa12.2□□□□□ -0.46
TPM3-219ENST00000509409 ZNF581Q9P0T4 197 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms