RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 FAM172BPA6NC97 362 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 TRIM64CA6NLI5 447 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 RNF212BA8MTL3 300 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 NPFFO15130 113 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 LDLRAD4O15165 306 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 HOXA3O43365 443 aaPredicted RBP5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 TUSC2O75896 110 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 CYB5AP00167 134 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 CSN2P05814 226 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 CD2P06729 351 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 CHRM2P08172 466 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 HSMCR30P0CW71 290 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 GABRR1P24046 479 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 PRTN3P24158 256 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 SSTR5P35346 364 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 TGFBR1P36897 503 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 EDDM3BP56851 147 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 PPP3R1P63098 170 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 AESQ08117 197 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 IL13RA2Q14627 380 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 KCTD21Q4G0X4 260 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 TOR2AQ5JU69 321 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 C1orf100Q5SVJ3 147 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 STEAP3Q658P3 488 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 KRTAP5-3Q6L8H2 238 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 GLIPR1L1Q6UWM5 242 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 OVCH2Q7RTZ1 564 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 SATL1Q86VE3 508 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 Q8IYB0 196 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 BPIFB2Q8N4F0 458 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 UBALD1Q8TB05 177 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 PIFOQ8TCI5 191 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 UFD1Q92890 307 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 NICN1Q9BSH3 213 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 CHIAQ9BZP6 476 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 BANF2Q9H503 90 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 ZNF286AQ9HBT8 521 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 CHCHD3Q9NX63 227 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 KIF25Q9UIL4 384 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 ODAMA1E959 279 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 FAM90A8PA6NJQ4 464 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 TMEM14DPA8MWL7 114 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 C15orf65H3BRN8 121 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 MGST3O14880 152 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 SLC22A1O15245 554 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 CHST1O43916 411 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 CLPXO76031 633 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 RNASE1P07998 156 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 IGHV1-8P0DP01 117 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 ZNF44P15621 663 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 OMGP23515 440 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 ERP29P30040 261 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 GABRA5P31644 462 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 EFNB2P52799 333 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 CLDN12P56749 244 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 KRTAP10-3P60369 221 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 PAX5Q02548 391 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 MED21Q13503 144 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 P2RY14Q15391 338 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 TMEM95Q3KNT9 176 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 SLC22A6Q4U2R8 563 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 HSD17B12Q53GQ0 312 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 CT83Q5H943 113 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 GPR157Q5UAW9 335 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 ZNF626Q68DY1 528 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 AWAT2Q6E213 333 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 Q6YL49 198 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 CEACAM19Q7Z692 300 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 GAPTQ8N292 157 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 JAGN1Q8N5M9 183 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 SUMF2Q8NBJ7 301 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 ZBTB34Q8NCN2 500 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 OR4P4Q8NGL7 312 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 TBC1D15Q8TC07 691 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 PHYHIPQ92561 330 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 FAM46BQ96A09 425 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 MISP3Q96FF7 219 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 RAX2Q96IS3 184 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 NR1H4Q96RI1 486 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 SUCNR1Q9BXA5 334 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 MS4A7Q9GZW8 240 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 METTL8Q9H825 291 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 ING3Q9NXR8 418 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 ING4Q9UNL4 249 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 AK6Q9Y3D8 172 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 LINC00312Q9Y6C7 94 aa5.83□□□□□ -1.48
TOPBP1-207ENST00000509162 CLDN34H7C241 214 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 IFNA2P01563 188 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 CLEC2LP0C7M8 214 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 ZNF728P0DKX0 622 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 MGMTP16455 207 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 CALRP27797 417 aaKnown RBP5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 CHATP28329 748 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 GPR50Q13585 617 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 DIAPH2-AS1Q14236 149 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 MOGAT2Q3SYC2 334 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 PAN3Q58A45 887 aaKnown RBP5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 OLFML2AQ68BL7 652 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 HIST2H2BDQ6DRA6 164 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 CCBE1Q6UXH8 406 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms