RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 DPCDQ9BVM2 203 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 BARHL1Q9BZE3 327 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 PRSS22Q9GZN4 317 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 VCXQ9H320 206 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 SERTAD4Q9NUC0 356 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 CNOT2Q9NZN8 540 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 NKX1-2Q9UD57 310 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 PSORS1C1Q9UIG5 152 aa11.89□□□□□ -0.51
UBE2D3-228ENST00000508974 KBTBD11-OT1A0A1B0GTJ5 212 aa11.88□□□□□ -0.51
UBE2D3-228ENST00000508974 LEUTXA8MZ59 168 aa11.88□□□□□ -0.51
UBE2D3-228ENST00000508974 BUB1B-PAK6H3BSN5 160 aa11.88□□□□□ -0.51
UBE2D3-228ENST00000508974 CD28P10747 220 aa11.88□□□□□ -0.51
UBE2D3-228ENST00000508974 CELP19835 753 aa11.88□□□□□ -0.51
UBE2D3-228ENST00000508974 SSTR5P35346 364 aa11.88□□□□□ -0.51
UBE2D3-228ENST00000508974 DYNLT3P51808 116 aa11.88□□□□□ -0.51
UBE2D3-228ENST00000508974 PRRX1P54821 245 aa11.88□□□□□ -0.51
UBE2D3-228ENST00000508974 WNT4P56705 351 aa11.88□□□□□ -0.51
UBE2D3-228ENST00000508974 HLA-DRB5Q30154 266 aa11.88□□□□□ -0.51
UBE2D3-228ENST00000508974 NSUN5P1Q3KNT7 163 aa11.88□□□□□ -0.51
UBE2D3-228ENST00000508974 TPTE2P1Q5T6R2 138 aa11.88□□□□□ -0.51
UBE2D3-228ENST00000508974 C11orf88Q6PI97 169 aa11.88□□□□□ -0.51
UBE2D3-228ENST00000508974 ASCL4Q6XD76 172 aa11.88□□□□□ -0.51
UBE2D3-228ENST00000508974 ZNF565Q8N9K5 539 aa11.88□□□□□ -0.51
UBE2D3-228ENST00000508974 UBALD1Q8TB05 177 aa11.88□□□□□ -0.51
UBE2D3-228ENST00000508974 IDI2-AS1Q9NZ38 188 aa11.88□□□□□ -0.51
UBE2D3-228ENST00000508974 MRPS28Q9Y2Q9 187 aaKnown RBP11.88□□□□□ -0.51
UBE2D3-228ENST00000508974 NOTCH1P46531 2555 aa11.87□□□□□ -0.51
UBE2D3-228ENST00000508974 A0A1W2PPE3 182 aa11.87□□□□□ -0.51
UBE2D3-228ENST00000508974 SH2D7A6NKC9 451 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-228ENST00000508974 IL1AP01583 271 aa11.87□□□□□ -0.51
UBE2D3-228ENST00000508974 CD34P28906 385 aa11.87□□□□□ -0.51
UBE2D3-228ENST00000508974 BRS3P32247 399 aa11.87□□□□□ -0.51
UBE2D3-228ENST00000508974 CEACAM3P40198 252 aa11.87□□□□□ -0.51
UBE2D3-228ENST00000508974 TAS2R43P59537 309 aa11.87□□□□□ -0.51
UBE2D3-228ENST00000508974 Q8NFD4 153 aa11.87□□□□□ -0.51
UBE2D3-228ENST00000508974 CCDC107Q8WV48 283 aa11.87□□□□□ -0.51
UBE2D3-228ENST00000508974 IL36GQ9NZH8 169 aa11.87□□□□□ -0.51
UBE2D3-228ENST00000508974 TRBV5-7A0A0A0MS05 114 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 FAM90A22PA8MWA6 464 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 PTGES3LE9PB15 166 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 FBXO24O75426 580 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 CGB3P0DN86 165 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 CGB7P0DN87 165 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 FSTP19883 344 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 VDAC2P45880 294 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 ARHGDIBP52566 201 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 INSL4Q14641 139 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 AWAT2Q6E213 333 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 GLIPR1L1Q6UWM5 242 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 Q8N2B8 174 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 NANOGP1Q8N7R0 232 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 OR9G1Q8NH87 305 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 FBLIM1Q8WUP2 373 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 CAPSLQ8WWF8 208 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 CFHR4Q92496 578 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 TFAP2CQ92754 450 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 TOMM40LQ969M1 308 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 DERL3Q96Q80 235 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 SLC25A33Q9BSK2 321 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 MMP28Q9H239 520 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 DCLRE1BQ9H816 532 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 PLCXD1Q9NUJ7 323 aa11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 PAK1IP1Q9NWT1 392 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-228ENST00000508974 A0A087X0M5 115 aa11.85□□□□□ -0.51
UBE2D3-228ENST00000508974 A0A1B0GX30 115 aa11.85□□□□□ -0.51
UBE2D3-228ENST00000508974 H3BUI4 141 aa11.85□□□□□ -0.51
UBE2D3-228ENST00000508974 J3QR06 171 aa11.85□□□□□ -0.51
UBE2D3-228ENST00000508974 GTF2F2P13984 249 aa11.85□□□□□ -0.51
UBE2D3-228ENST00000508974 KCNJ3P48549 501 aa11.85□□□□□ -0.51
UBE2D3-228ENST00000508974 AQP4P55087 323 aa11.85□□□□□ -0.51
UBE2D3-228ENST00000508974 DIAPH2-AS1Q14236 149 aa11.85□□□□□ -0.51
UBE2D3-228ENST00000508974 ABCA11PQ4W5N1 156 aa11.85□□□□□ -0.51
UBE2D3-228ENST00000508974 NHLRC3Q5JS37 347 aa11.85□□□□□ -0.51
UBE2D3-228ENST00000508974 DTX3Q8N9I9 347 aa11.85□□□□□ -0.51
UBE2D3-228ENST00000508974 SGCDQ92629 289 aa11.85□□□□□ -0.51
UBE2D3-228ENST00000508974 RPEQ96AT9 228 aa11.85□□□□□ -0.51
UBE2D3-228ENST00000508974 CYYR1Q96J86 154 aa11.85□□□□□ -0.51
UBE2D3-228ENST00000508974 BANF2Q9H503 90 aa11.85□□□□□ -0.51
UBE2D3-228ENST00000508974 PSG11Q9UQ72 335 aa11.85□□□□□ -0.51
UBE2D3-228ENST00000508974 ERGIC3Q9Y282 383 aa11.85□□□□□ -0.51
UBE2D3-228ENST00000508974 AMMECR1Q9Y4X0 333 aaPredicted RBP11.85□□□□□ -0.51
UBE2D3-228ENST00000508974 IGHV3-43A0A0B4J1X8 118 aa11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 TMEM30CPA0ZSE6 113 aa11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 LY6LH3BQJ8 138 aa11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 PIN1P1O15428 100 aa11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 ZNF780AO75290 641 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 GPX5O75715 221 aa11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 LPLP06858 475 aa11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 IGHV3-43DP0DP04 118 aa11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 VHLP40337 213 aa11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 MNDAP41218 407 aa11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 GABPB1Q06547 395 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 MPV17LQ2QL34 196 aa11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 C9orf152Q5JTZ5 239 aa11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 FAM53AQ6NSI3 398 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 OR56B4Q8NH76 319 aa11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 NRG4Q8WWG1 115 aa11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 FAM46BQ96A09 425 aa11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 CREB3L1Q96BA8 519 aa11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 AKR1E2Q96JD6 320 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms