RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 SOX15O60248 233 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 ZNF705DP0CH99 300 aaPredicted RBP12.37□□□□□ -0.43
TRIM41-204ENST00000508930 ZNF705BP0CI00 300 aaPredicted RBP12.37□□□□□ -0.43
TRIM41-204ENST00000508930 GALR1P47211 349 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 RND2P52198 227 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 DPPA3Q6W0C5 159 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 SRD5A3Q9H8P0 318 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 CPAMD8Q8IZJ3 1885 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 AQP7P3A6NL99 342 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 TMEM50AO95807 157 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 SLC25A26Q70HW3 274 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 EXTL1Q92935 676 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 ZNF385AQ96PM9 386 aaKnown RBP12.37□□□□□ -0.43
TRIM41-204ENST00000508930 UCK1Q9HA47 277 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 CCL28Q9NRJ3 127 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 UNC80Q8N2C7 3258 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 PTPRSQ13332 1948 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 EREGO14944 169 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 ZNF16P17020 682 aaPredicted RBP12.37□□□□□ -0.43
TRIM41-204ENST00000508930 CTSSP25774 331 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 NUTF2P61970 127 aaKnown RBP12.37□□□□□ -0.43
TRIM41-204ENST00000508930 TMEM241Q24JQ0 296 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 C5orf24Q7Z6I8 188 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 ADPRHL1Q8NDY3 354 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 DEFB126Q9BYW3 111 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 Q9N2K0 584 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 PRSS50Q9UI38 385 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 VAX2Q9UIW0 290 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 TCFL5Q9UL49 500 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 MMP17Q9ULZ9 603 aa12.37□□□□□ -0.43
TRIM41-204ENST00000508930 MAP1LC3B2A6NCE7 125 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 HMGB3O15347 200 aaKnown RBP12.36□□□□□ -0.43
TRIM41-204ENST00000508930 DUX1O43812 170 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 METTL15P1P0C7V9 234 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 PATE4P0C8F1 98 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 ZNF774Q6NX45 483 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 MAP1LC3BQ9GZQ8 125 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 FUT9Q9Y231 359 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 SDK2Q58EX2 2172 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 IGKV1-27A0A075B6S5 117 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 ZFAND5O76080 213 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 ZNF25P17030 456 aaPredicted RBP12.36□□□□□ -0.43
TRIM41-204ENST00000508930 BSXQ3C1V8 233 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 MRPL37Q9BZE1 423 aaKnown RBP12.36□□□□□ -0.43
TRIM41-204ENST00000508930 CBLN4Q9NTU7 201 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 NAT8Q9UHE5 227 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 CD300LBA8K4G0 201 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 GCGP01275 180 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 MYF5P13349 255 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 IQCJQ1A5X6 159 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 PHYHD1Q5SRE7 291 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 TMEM211Q6ICI0 200 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 DBX2Q6ZNG2 339 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 WFIKKN1Q96NZ8 548 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 TMEM242Q9NWH2 141 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 PCDH15Q96QU1 1955 aa12.36□□□□□ -0.43
TRIM41-204ENST00000508930 ZNF737O75373 536 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 CD38P28907 300 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 P2RY6Q15077 328 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 IZUMO4Q1ZYL8 232 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 ZNF818PQ6ZRF7 136 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 ANKRD37Q7Z713 158 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 MAML2Q8IZL2 1156 aaPredicted RBP12.35□□□□□ -0.43
TRIM41-204ENST00000508930 PCGF1Q9BSM1 259 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 IGKV1-12A0A0C4DH73 117 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 M0R143 59 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 IGKV1D-12P01611 117 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 CD55P08174 381 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 ZNF705AQ6ZN79 300 aaPredicted RBP12.35□□□□□ -0.43
TRIM41-204ENST00000508930 OR2V1Q8NHB1 315 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 ABHD14BQ96IU4 210 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 TMEM68Q96MH6 324 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 TMEM56Q96MV1 263 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 TMEM56-RWDD3S4R434 201 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 THADAQ6YHU6 1953 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 ID3Q02535 119 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 PAX5Q02548 391 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 MRGPRGQ86SM5 289 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 OR2M3Q8NG83 312 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 OR10G4Q8NGN3 311 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 UCN2Q96RP3 112 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 OR51I2Q9H344 312 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 VSIRQ9H7M9 311 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 RNF150Q9ULK6 438 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 MTCH2Q9Y6C9 303 aa12.35□□□□□ -0.43
TRIM41-204ENST00000508930 ADAMTS9Q9P2N4 1935 aa12.34□□□□□ -0.43
TRIM41-204ENST00000508930 RCC1LQ96I51 464 aaKnown RBP12.34□□□□□ -0.43
TRIM41-204ENST00000508930 WNT16Q9UBV4 365 aa12.34□□□□□ -0.43
TRIM41-204ENST00000508930 MBP02144 154 aa12.34□□□□□ -0.43
TRIM41-204ENST00000508930 SCTP09683 121 aa12.34□□□□□ -0.43
TRIM41-204ENST00000508930 FUT6P51993 359 aa12.34□□□□□ -0.43
TRIM41-204ENST00000508930 OR8B8Q15620 311 aa12.34□□□□□ -0.43
TRIM41-204ENST00000508930 ACTR3CQ9C0K3 210 aaPredicted RBP12.34□□□□□ -0.43
TRIM41-204ENST00000508930 RBKSQ9H477 322 aa12.34□□□□□ -0.43
TRIM41-204ENST00000508930 PTRH2Q9Y3E5 179 aaKnown RBP12.34□□□□□ -0.43
TRIM41-204ENST00000508930 G3V3Y1 287 aa12.34□□□□□ -0.43
TRIM41-204ENST00000508930 CEACAM1P13688 526 aa12.34□□□□□ -0.43
TRIM41-204ENST00000508930 MDH2P40926 338 aaKnown RBP12.34□□□□□ -0.43
TRIM41-204ENST00000508930 RPL29P47914 159 aaKnown RBP12.34□□□□□ -0.43
TRIM41-204ENST00000508930 HNRNPKP61978 463 aaKnown RBP eCLIP12.34□□□□□ -0.433e-7■■■■□ 24
Retrieved 100 of 20,778 RNA–protein pairs in 452.1 ms