RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 SUMF2Q8NBJ7 301 aa16.1■□□□□ 0.17
SFXN1-209ENST00000508290 C17orf50Q8WW18 174 aa16.1■□□□□ 0.17
SFXN1-209ENST00000508290 WFDC12Q8WWY7 111 aa16.1■□□□□ 0.17
SFXN1-209ENST00000508290 CST11Q9H112 138 aa16.1■□□□□ 0.17
SFXN1-209ENST00000508290 RAB9BQ9NP90 201 aa16.1■□□□□ 0.17
SFXN1-209ENST00000508290 KIF25Q9UIL4 384 aa16.1■□□□□ 0.17
SFXN1-209ENST00000508290 TMEM30CPA0ZSE6 113 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 MAGEA13PA6NCF6 341 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 HSPB6O14558 160 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 GEMIN2O14893 280 aaKnown RBP16.09■□□□□ 0.17
SFXN1-209ENST00000508290 MRPS14O60783 128 aaKnown RBP16.09■□□□□ 0.17
SFXN1-209ENST00000508290 CA11O75493 328 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 SC5DO75845 299 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 GLAP06280 429 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 GZMHP20718 246 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 GLP1RP43220 463 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 SSX2Q16385 188 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 HSD17B12Q53GQ0 312 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 PRAMEF5Q5TYX0 476 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 GLT8D1Q68CQ7 371 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 LHFPL4Q7Z7J7 247 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 LYPD6Q86Y78 171 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 OR4C13Q8NGP0 309 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 LINC01006Q8NI28 216 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 NDNFQ8TB73 568 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 CNBD2Q96M20 576 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 TMED9Q9BVK6 235 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 NPFFR1Q9GZQ6 430 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 CCDC90BQ9GZT6 254 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 PPIL3Q9H2H8 161 aaKnown RBP16.09■□□□□ 0.17
SFXN1-209ENST00000508290 DPM3Q9P2X0 92 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 RNF114Q9Y508 228 aa16.09■□□□□ 0.17
SFXN1-209ENST00000508290 LEUTXA8MZ59 168 aa16.08■□□□□ 0.16
SFXN1-209ENST00000508290 OOSP1A8MZH6 123 aa16.08■□□□□ 0.16
SFXN1-209ENST00000508290 TOR1AO14656 332 aa16.08■□□□□ 0.16
SFXN1-209ENST00000508290 ARL6IP5O75915 188 aa16.08■□□□□ 0.16
SFXN1-209ENST00000508290 IL1AP01583 271 aa16.08■□□□□ 0.16
SFXN1-209ENST00000508290 IGLV1-47P01700 117 aa16.08■□□□□ 0.16
SFXN1-209ENST00000508290 CGB3P0DN86 165 aa16.08■□□□□ 0.16
SFXN1-209ENST00000508290 CGB7P0DN87 165 aa16.08■□□□□ 0.16
SFXN1-209ENST00000508290 TBCEQ15813 527 aaPredicted RBP16.08■□□□□ 0.16
SFXN1-209ENST00000508290 FAM189A2Q15884 450 aa16.08■□□□□ 0.16
SFXN1-209ENST00000508290 Q6ZSV7 163 aa16.08■□□□□ 0.16
SFXN1-209ENST00000508290 OR4P4Q8NGL7 312 aa16.08■□□□□ 0.16
SFXN1-209ENST00000508290 ZNF696Q9H7X3 374 aa16.08■□□□□ 0.16
SFXN1-209ENST00000508290 CALYQ9NYX4 217 aa16.08■□□□□ 0.16
SFXN1-209ENST00000508290 RCC2Q9P258 522 aaKnown RBP16.08■□□□□ 0.16
SFXN1-209ENST00000508290 FBLN5Q9UBX5 448 aa16.08■□□□□ 0.16
SFXN1-209ENST00000508290 TCF19Q9Y242 345 aa16.08■□□□□ 0.16
SFXN1-209ENST00000508290 DSCAML1Q8TD84 2053 aa16.07■□□□□ 0.16
SFXN1-209ENST00000508290 MCRIP1C9JLW8 97 aa16.07■□□□□ 0.16
SFXN1-209ENST00000508290 NPIPB11E5RHQ5 1161 aa16.07■□□□□ 0.16
SFXN1-209ENST00000508290 UCHL1P09936 223 aa16.07■□□□□ 0.16
SFXN1-209ENST00000508290 C17orf58Q2M2W7 97 aa16.07■□□□□ 0.16
SFXN1-209ENST00000508290 TMEM30BQ3MIR4 351 aa16.07■□□□□ 0.16
SFXN1-209ENST00000508290 PRR31Q5SQ13 230 aa16.07■□□□□ 0.16
SFXN1-209ENST00000508290 LIPKQ5VXJ0 399 aa16.07■□□□□ 0.16
SFXN1-209ENST00000508290 CCDC144NLQ6NUI1 221 aa16.07■□□□□ 0.16
SFXN1-209ENST00000508290 CEACAM19Q7Z692 300 aa16.07■□□□□ 0.16
SFXN1-209ENST00000508290 OR9G1Q8NH87 305 aa16.07■□□□□ 0.16
SFXN1-209ENST00000508290 NKX3-1Q99801 234 aaPredicted RBP16.07■□□□□ 0.16
SFXN1-209ENST00000508290 ING3Q9NXR8 418 aa16.07■□□□□ 0.16
SFXN1-209ENST00000508290 AMMECR1Q9Y4X0 333 aaPredicted RBP16.07■□□□□ 0.16
SFXN1-209ENST00000508290 F2RL2O00254 374 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 MMP23AO75900 390 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 HSMCR30P0CW71 290 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 MGMTP16455 207 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 CPEP16870 476 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 SRMP19623 302 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 GABRA5P31644 462 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 BRS3P32247 399 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 KIR2DS4P43632 304 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 PROK1P58294 105 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 GABARAPL2P60520 117 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 C1orf100Q5SVJ3 147 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 ATAD3CQ5T2N8 411 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 OR13A1Q8NGR1 328 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 PLPPR1Q8TBJ4 325 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 PIFOQ8TCI5 191 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 NEK7Q8TDX7 302 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 SGCDQ92629 289 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 KIRREL1Q96J84 757 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 MGLLQ99685 303 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 IDI2-AS1Q9NZ38 188 aa16.06■□□□□ 0.16
SFXN1-209ENST00000508290 CRTAPO75718 401 aaPredicted RBP16.05■□□□□ 0.16
SFXN1-209ENST00000508290 LY6EQ16553 131 aa16.05■□□□□ 0.16
SFXN1-209ENST00000508290 HLA-DRB5Q30154 266 aa16.05■□□□□ 0.16
SFXN1-209ENST00000508290 TRAT1Q6PIZ9 186 aa16.05■□□□□ 0.16
SFXN1-209ENST00000508290 ZNF367Q7RTV3 350 aa16.05■□□□□ 0.16
SFXN1-209ENST00000508290 C16orf82Q7Z2V1 217 aa16.05■□□□□ 0.16
SFXN1-209ENST00000508290 OR52M1Q8NGK5 317 aa16.05■□□□□ 0.16
SFXN1-209ENST00000508290 OR2T6Q8NHC8 308 aa16.05■□□□□ 0.16
SFXN1-209ENST00000508290 TAF15Q92804 592 aaKnown RBP eCLIP16.05■□□□□ 0.16
SFXN1-209ENST00000508290 CITED1Q99966 193 aa16.05■□□□□ 0.16
SFXN1-209ENST00000508290 SELENOIQ9C0D9 397 aa16.05■□□□□ 0.16
SFXN1-209ENST00000508290 ACOT13Q9NPJ3 140 aa16.05■□□□□ 0.16
SFXN1-209ENST00000508290 A0A1W2PP11 408 aa16.04■□□□□ 0.16
SFXN1-209ENST00000508290 A6NDX4 124 aa16.04■□□□□ 0.16
SFXN1-209ENST00000508290 ORC5O43913 435 aa16.04■□□□□ 0.16
SFXN1-209ENST00000508290 CD37P11049 281 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms