RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 TRAV18A0A075B6X5 111 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 DUXBA0A1W2PPF3 345 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 LRP5LA4QPB2 252 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 DPRXA6NFQ7 191 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 H0YJW9 148 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 H3BRM9 83 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 J3QLW9 94 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 FOXH1O75593 365 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 VENTXO95231 258 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 IFNA1P01562 189 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 NGFRP08138 427 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 SELPP16109 830 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 IGFBP4P22692 258 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 RPL24P83731 157 aaKnown RBP9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 FOXL1Q12952 345 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 HLA-BQ31612 363 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 AMZ1Q400G9 498 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 SIGLECL1Q8N7X8 197 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 OR4F5Q8NH21 305 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 GMPPAQ96IJ6 420 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 RCHY1Q96PM5 261 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 TMEM133Q9H2Q1 129 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 MED20Q9H944 212 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 IL36GQ9NZH8 169 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 NAT8BQ9UHF3 227 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 ZNF214Q9UL59 606 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 KLHDC2Q9Y2U9 406 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 TMED7Q9Y3B3 224 aa9.35□□□□□ -0.91
PDLIM5-210ENST00000508216 LOC730098B7Z3J9 87 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 PGCP20142 388 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 NTSR1P30989 418 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 OPRM1P35372 400 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 ACVRL1P37023 503 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 SRSF1Q07955 248 aaKnown RBP eCLIP9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 IGFBP7Q16270 282 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 DCAF4L1Q3SXM0 396 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 MPV17L2Q567V2 206 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 FAM182BQ5T319 152 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 SPATA31B1PQ5VZV4 182 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 CPEB2Q7Z5Q1 589 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 WDR5BQ86VZ2 330 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 TEX26Q8N6G2 289 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 OR6N2Q8NGY6 317 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 OR8S1Q8NH09 359 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 PP6455Q8WZ26 134 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 PIGTQ969N2 578 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 PELI1Q96FA3 418 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 LINC00615Q96LM1 132 aaPredicted RBP9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 TIMM29Q9BSF4 260 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 VN1R1Q9GZP7 353 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 MS4A5Q9H3V2 200 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 TMEM30AQ9NV96 361 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 ARL15Q9NXU5 204 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 C1RLQ9NZP8 487 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 CYSLTR1Q9Y271 337 aa9.34□□□□□ -0.91
PDLIM5-210ENST00000508216 TRBV5-5A0A0J9YX44 114 aa9.33□□□□□ -0.92
PDLIM5-210ENST00000508216 SLC22A20A6NK97 555 aa9.33□□□□□ -0.92
PDLIM5-210ENST00000508216 KIAA1324LA8MWY0 1029 aaPredicted RBP9.33□□□□□ -0.92
PDLIM5-210ENST00000508216 ZNF732B4DXR9 585 aa9.33□□□□□ -0.92
PDLIM5-210ENST00000508216 SERPINE2P07093 398 aa9.33□□□□□ -0.92
PDLIM5-210ENST00000508216 BCL2P10415 239 aa9.33□□□□□ -0.92
PDLIM5-210ENST00000508216 OR2K2Q8NGT1 345 aa9.33□□□□□ -0.92
PDLIM5-210ENST00000508216 ULBP2Q9BZM5 246 aa9.33□□□□□ -0.92
PDLIM5-210ENST00000508216 PARP12Q9H0J9 701 aaKnown RBP9.33□□□□□ -0.92
PDLIM5-210ENST00000508216 CXCL16Q9H2A7 254 aa9.33□□□□□ -0.92
PDLIM5-210ENST00000508216 ZNF160Q9HCG1 818 aa9.33□□□□□ -0.92
PDLIM5-210ENST00000508216 MGAMO43451 1857 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 TEX48A0A1B0GUV7 120 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 M0QYG6 137 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 KBTBD11O94819 623 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 CD55P08174 381 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 CDKN2AP42771 156 aaKnown RBP9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 WIPI1Q5MNZ9 446 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 ZNF584Q8IVC4 421 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 UMODL1-AS1Q8N2C9 162 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 OR51T1Q8NGJ9 327 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 OR4A5Q8NH83 315 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 GNPNAT1Q96EK6 184 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 PCED1BQ96HM7 432 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 SDF2Q99470 211 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 LINC00597Q9H2U6 94 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 ONECUT1Q9UBC0 465 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 AK3Q9UIJ7 227 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 A0A087WUU8 490 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 CENPVL3A0A0U1RRI6 287 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 MEIS3P2A8K0S8 358 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 CD300LBA8K4G0 201 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 DEGS1O15121 323 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 SERF1AO75920 110 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 CFIP05156 583 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 FGF1P05230 155 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 ADRA2CP18825 462 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 IL3RAP26951 378 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 LHX2P50458 406 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 ZNF117Q03924 483 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 LAMTOR4Q0VGL1 99 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 PDE7AQ13946 482 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 Q499Y3 187 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 FFAR4Q5NUL3 377 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 STUMQ69YW2 141 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms