RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 LRRC28Q86X40 367 aaPredicted RBP-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 NBPF5PQ86XG9 351 aaPredicted RBP-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 SLC35F6Q8N357 371 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 JAGN1Q8N5M9 183 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 CCNYL1Q8N7R7 359 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 NECAB1Q8N987 351 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 OR4C5Q8NGB2 326 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 OR8B12Q8NGG6 310 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 OR52E5Q8NH55 327 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 SCGB1C1Q8TD33 95 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 CCL17Q92583 94 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 NRGNQ92686 78 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 GLT1D1Q96MS3 346 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 OLFM3Q96PB7 478 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 METTL26Q96S19 204 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 MRPL57Q9BQC6 102 aaKnown RBP-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 CENPKQ9BS16 269 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 SHCBP1LQ9BZQ2 653 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 LRRC40Q9H9A6 602 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 ANKRA2Q9H9E1 313 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 MCUBQ9NWR8 336 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 LYARQ9NX58 379 aaKnown RBP-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 PITPNC1Q9UKF7 332 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 REREQ9P2R6 1566 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 CHD3Q12873 2000 aaKnown RBP-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 DNMT1P26358 1616 aaKnown RBP-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 CACNA1CQ13936 2221 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 IGHV3-73A0A0B4J1V6 119 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 TRAV41A0A0B4J266 112 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 A0A0D9SG42 100 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 MDFIC2A0A1B0GVS7 189 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 A0A1B0GXF2 115 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 TRAPPC13A5PLN9 417 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 C2orf74A8MZ97 194 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 C19orf84I3L1E1 186 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 J3QLI3 93 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 ZNF701M0R085 212 aaPredicted RBP-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 ZW10O43264 779 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 MPDU1O75352 247 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 PGLYRP1O75594 196 aaPredicted RBP-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 FCN3O75636 299 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 LY6HO94772 140 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 LTAP01374 205 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 CRPP02741 224 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 IFNW1P05000 195 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 RPSAP08865 295 aaKnown RBP-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 OR4A8P0C604 315 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 ZNF728P0DKX0 622 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 RNASE3P12724 160 aaKnown RBP-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 NQO1P15559 274 aaKnown RBP-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 TAC1P20366 129 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 M6PRP20645 277 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 S100A2P29034 98 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 ARL2P36404 184 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 IFNAR2P48551 515 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 EVX1P49640 407 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 CLDN6P56747 220 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 RUNX1Q01196 453 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 GOLGA7BQ2TAP0 167 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 LRRC75BQ2VPJ9 315 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 CEACAM16Q2WEN9 425 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 ANKDD1AQ495B1 522 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 TMEM155Q4W5P6 130 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 PABPC1L2AQ5JQF8 200 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 UBE2NLQ5JXB2 153 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 CHCHD2P9Q5T1J5 151 aaPredicted RBP-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 HES3Q5TGS1 186 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 TMEM42Q69YG0 159 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 OR10K2Q6IF99 312 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 CENPPQ6IPU0 288 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 TMEM220Q6QAJ8 160 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 SSX7Q7RTT5 188 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 FAM122BQ7Z309 247 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 GLT6D1Q7Z4J2 308 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 PPP1R42Q7Z4L9 355 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 TBC1D21Q8IYX1 336 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 KIF2BQ8N4N8 673 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 TRIML2Q8N7C3 387 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 C8orf31Q8N9H6 132 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 OR11H1Q8NG94 326 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 NT5CQ8TCD5 201 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 MBD3L1Q8WWY6 194 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 GTF2H4Q92759 462 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 TAMM41Q96BW9 452 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 LINC00526Q96FQ7 95 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 TSGA13Q96PP4 275 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 QKIQ96PU8 341 aaKnown RBP eCLIP-0.34□□□□□ -2.465e-13■■■■□ 20.4
CLOCK-207ENST00000508049 CRACR2AQ9BSW2 395 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 C20orf24Q9BUV8 137 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 DEFB129Q9H1M3 183 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 C11orf1Q9H5F2 150 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 POMKQ9H5K3 350 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 WDR55Q9H6Y2 383 aaPredicted RBP-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 KCNIP2Q9NS61 270 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 PTTG3PQ9NZH4 202 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 GLS2Q9UI32 602 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 TBC1D24Q9ULP9 559 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 SCN10AQ9Y5Y9 1956 aa-0.34□□□□□ -2.46
CLOCK-207ENST00000508049 SBNO1A3KN83 1393 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms