RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, human

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-210	ENST00000507965	BUB1B-PAK6	H3BSN5	160 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	FKBP6	O75344	327 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	DUS4L	O95620	317 aa	Known RBP	4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	CLIC3	O95833	236 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	OR2H2	O95918	312 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	IGKV1D-12	P01611	117 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	IGHV3-7	P01780	117 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	SNRNP70	P08621	437 aa	Known RBP	4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	ANXA8	P13928	327 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	KIR3DL2	P43630	455 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	OR3A4P	P47883	348 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	DAP	P51397	102 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	ZNF134	P52741	427 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	CRISP1	P54107	249 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	ACTR3	P61158	418 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	RPL23A	P62750	156 aa	Known RBP	4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	BDH1	Q02338	343 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	AES	Q08117	197 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	IL18R1	Q13478	541 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	DIAPH2-AS1	Q14236	149 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	GK3P	Q14409	553 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	PTGES3	Q15185	160 aa	Known RBP	4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	DEFB136	Q30KP8	78 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	DNAL1	Q4LDG9	190 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	TPTE2P1	Q5T6R2	138 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	AADACL4	Q5VUY2	407 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	MEPCE	Q7L2J0	689 aa	Known RBP	4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	OR2W3	Q7Z3T1	314 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	KCTD20	Q7Z5Y7	419 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	CATSPERD	Q86XM0	798 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	RDH10	Q8IZV5	341 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	FAM58A	Q8N1B3	248 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	PRSS35	Q8N3Z0	413 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	TCEANC	Q8N8B7	351 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	YIPF7	Q8N8F6	280 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	KLHL30-AS1	Q8NEE0	82 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	OR5D18	Q8NGL1	313 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	OR56B4	Q8NH76	319 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	SCARB1	Q8WTV0	552 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	CAPSL	Q8WWF8	208 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	DPF1	Q92782	380 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	LEAP2	Q969E1	77 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	RBMXL1	Q96E39	390 aa	Known RBP	4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	ADAT3	Q96EY9	351 aa	Predicted RBP	4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	BORCS8	Q96FH0	119 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	COQ2	Q96H96	371 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	AKR1E2	Q96JD6	320 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	SPACA5	Q96QH8	159 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	PRR25	Q96S07	402 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	THTPA	Q9BU02	230 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	CLN6	Q9NWW5	311 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	GAR1	Q9NY12	217 aa	Known RBP	4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	DPM3	Q9P2X0	92 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	HHLA2	Q9UM44	414 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	SLC7A11	Q9UPY5	501 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	GSTK1	Q9Y2Q3	226 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	MOB4	Q9Y3A3	225 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	TMEM14A	Q9Y6G1	99 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	HSPE1-MOB4	S4R3N1	261 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	RYR2	Q92736	4967 aa		4.36	□□□□□ -1.71
ATXN3-210	ENST00000507965	TRGV10	A0A0A0MS01	117 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965		A0A1W2PPI3	338 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	ODAM	A1E959	279 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	LEUTX	A8MZ59	168 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	DIRC3	C9JPN6	131 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	HSPB6	O14558	160 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	MGST3	O14880	152 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	SYT7	O43581	403 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	GATB	O75879	557 aa	Known RBP	4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	ACTL6B	O94805	426 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	KRT8	P05787	483 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	CD34	P28906	385 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	PPIF	P30405	207 aa	Known RBP	4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	BRS3	P32247	399 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	VHL	P40337	213 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	PTGFR	P43088	359 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	FUT6	P51993	359 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	RAB25	P57735	213 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	BLOC1S1	P78537	153 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	EFNB1	P98172	346 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	ZNF146	Q15072	292 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	C17orf58	Q2M2W7	97 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	TP53I3	Q53FA7	332 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	SPIN3	Q5JUX0	258 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	SLX4IP	Q5VYV7	408 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	NXNL2	Q5VZ03	156 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	C12orf73	Q69YU5	71 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	FAHD1	Q6P587	224 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	HEPN1	Q6WQI6	88 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	ZBTB49	Q6ZSB9	765 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	ARHGAP24	Q8N264	748 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	C5orf56	Q8N8D9	126 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	OR51A4	Q8NGJ6	313 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	OR10AC1	Q8NH08	325 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	ZNF596	Q8TC21	504 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	TMEM163	Q8TC26	289 aa		4.35	□□□□□ -1.71
ATXN3-210	ENST00000507965	STMN2	Q93045	179 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms