RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 CTLA4P16410 223 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 AKR1C4P17516 323 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 MAGEA6P43360 314 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 HSPA13P48723 471 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 OR2B6P58173 313 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 OR10A3P58181 314 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 RAB31Q13636 194 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 MMDQ15546 238 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 OR10J3Q5JRS4 329 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 TMPPEQ6ZT21 453 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 LRP11Q86VZ4 500 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 OR5P3Q8WZ94 311 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 RORBQ92753 470 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 CFAP53Q96M91 514 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 HIGD2AQ9BW72 106 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 TSSK6Q9BXA6 273 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 EBPLQ9BY08 206 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 OR2D2Q9H210 308 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 FBXL15Q9H469 300 aa1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 TBL2Q9Y4P3 447 aaKnown RBP1.9□□□□□ -2.11
HMGB1P28-201ENST00000507778 LTBP4Q8N2S1 1624 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 IGLV10-54A0A075B6I4 117 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 TRBV24-1A0A075B6N3 115 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 IGKV1D-37A0A075B6S9 117 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 E7EQL1 145 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 FGF16O43320 207 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 GYPCP04921 128 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 ANGPT1Q15389 498 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 SYCP1Q15431 976 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 SMARCD3Q6STE5 483 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 LYPD6Q86Y78 171 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 SYCE1Q8N0S2 351 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 C17orf78Q8N4C9 275 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 Q8NAQ8 132 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 CCDC127Q96BQ5 260 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 DDIT4LQ96D03 193 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 B9D2Q9BPU9 175 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 OR5V1Q9UGF6 321 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 LOXHD1Q8IVV2 1947 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 SEC16AO15027 2179 aa1.89□□□□□ -2.11
HMGB1P28-201ENST00000507778 A0A1B0GTI1 187 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 A0A1B0GU33 70 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 ARGFXA6NJG6 315 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 HSBP1L1C9JCN9 74 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 CDS2O95674 445 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 OPN1SWP03999 348 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 PSKH1P11801 424 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 ATF1P18846 271 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 EVI2BP34910 448 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 GZMMP51124 257 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 MP68P56378 58 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 TNFRSF9Q07011 255 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 ZBTB6Q15916 424 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 TMEM249Q2WGJ8 235 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 PYCR3Q53H96 274 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 SSX7Q7RTT5 188 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 FAM19A3Q7Z5A8 133 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 HS3ST5Q8IZT8 346 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 KRTCAP2Q8N6L1 136 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 OR4A5Q8NH83 315 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 SPPL2BQ8TCT7 592 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 PDCD6IPQ8WUM4 868 aaKnown RBP1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 KCTD4Q8WVF5 259 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 GTF2H4Q92759 462 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 HBEGFQ99075 208 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 BCL2L14Q9BZR8 327 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 OR52A5Q9H2C5 316 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 COMMD9Q9P000 198 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 PHLDA3Q9Y5J5 127 aa1.88□□□□□ -2.11
HMGB1P28-201ENST00000507778 KIAA0232Q92628 1395 aa1.87□□□□□ -2.11
HMGB1P28-201ENST00000507778 RAB3GAP2Q9H2M9 1393 aa1.87□□□□□ -2.11
HMGB1P28-201ENST00000507778 THADAQ6YHU6 1953 aa1.87□□□□□ -2.11
HMGB1P28-201ENST00000507778 C8orf87E5RJ46 101 aa1.87□□□□□ -2.11
HMGB1P28-201ENST00000507778 POLR3GO15318 223 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P28-201ENST00000507778 SOX14O95416 240 aa1.87□□□□□ -2.11
HMGB1P28-201ENST00000507778 SYT1P21579 422 aa1.87□□□□□ -2.11
HMGB1P28-201ENST00000507778 INPP1P49441 399 aa1.87□□□□□ -2.11
HMGB1P28-201ENST00000507778 C1QTNF8P60827 252 aa1.87□□□□□ -2.11
HMGB1P28-201ENST00000507778 RAB2AP61019 212 aa1.87□□□□□ -2.11
HMGB1P28-201ENST00000507778 NIT1Q86X76 327 aa1.87□□□□□ -2.11
HMGB1P28-201ENST00000507778 MUC15Q8N387 334 aa1.87□□□□□ -2.11
HMGB1P28-201ENST00000507778 PPWD1Q96BP3 646 aaKnown RBP1.87□□□□□ -2.11
HMGB1P28-201ENST00000507778 PRSS27Q9BQR3 290 aa1.87□□□□□ -2.11
HMGB1P28-201ENST00000507778 ARL6Q9H0F7 186 aa1.87□□□□□ -2.11
HMGB1P28-201ENST00000507778 OR51E2Q9H255 320 aa1.87□□□□□ -2.11
HMGB1P28-201ENST00000507778 KCNIP2Q9NS61 270 aa1.87□□□□□ -2.11
HMGB1P28-201ENST00000507778 ARAP3Q8WWN8 1544 aa1.86□□□□□ -2.11
HMGB1P28-201ENST00000507778 ERICH2A1L162 156 aa1.86□□□□□ -2.11
HMGB1P28-201ENST00000507778 EFCAB9A8MZ26 197 aa1.86□□□□□ -2.11
HMGB1P28-201ENST00000507778 GPR171O14626 319 aa1.86□□□□□ -2.11
HMGB1P28-201ENST00000507778 EEF1E1O43324 174 aaKnown RBP1.86□□□□□ -2.11
HMGB1P28-201ENST00000507778 SH2D1AO60880 128 aa1.86□□□□□ -2.11
HMGB1P28-201ENST00000507778 BRI3O95415 125 aa1.86□□□□□ -2.11
HMGB1P28-201ENST00000507778 EPPINO95925 133 aa1.86□□□□□ -2.11
HMGB1P28-201ENST00000507778 GP1BAP07359 652 aa1.86□□□□□ -2.11
HMGB1P28-201ENST00000507778 LIMS3P0CW19 117 aa1.86□□□□□ -2.11
HMGB1P28-201ENST00000507778 LIMS4P0CW20 117 aa1.86□□□□□ -2.11
HMGB1P28-201ENST00000507778 RCVRNP35243 200 aa1.86□□□□□ -2.11
HMGB1P28-201ENST00000507778 ACTR1BP42025 376 aa1.86□□□□□ -2.11
HMGB1P28-201ENST00000507778 XRCC4Q13426 336 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms