RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 ETV3LQ6ZN32 361 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 ZNF329Q86UD4 541 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 THNSL2Q86YJ6 484 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 DRAM1Q8N682 238 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 C5orf56Q8N8D9 126 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 LINC00482Q8N8I6 264 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 OR52I1Q8NGK6 324 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 RFESDQ8TAC1 157 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 RGP1Q92546 391 aaPredicted RBP9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 CPNE2Q96FN4 548 aaPredicted RBP9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 JAM3Q9BX67 310 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 BARHL1Q9BZE3 327 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 NCOR1P1Q9H4R4 102 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 TAS2R4Q9NYW5 299 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 PSG11Q9UQ72 335 aa9.15□□□□□ -0.94
HMGCS1-204ENST00000507293 WI2-2373I1.2A0A1W2PRP0 233 aa9.14□□□□□ -0.95
HMGCS1-204ENST00000507293 NPIPB11E5RHQ5 1161 aa9.14□□□□□ -0.95
HMGCS1-204ENST00000507293 MPZL2O60487 215 aa9.14□□□□□ -0.95
HMGCS1-204ENST00000507293 HTR3BO95264 441 aa9.14□□□□□ -0.95
HMGCS1-204ENST00000507293 HOXD3P31249 432 aaPredicted RBP9.14□□□□□ -0.95
HMGCS1-204ENST00000507293 KCNJ3P48549 501 aa9.14□□□□□ -0.95
HMGCS1-204ENST00000507293 GTF2A1P52655 376 aaPredicted RBP9.14□□□□□ -0.95
HMGCS1-204ENST00000507293 RPL23AP62750 156 aaKnown RBP9.14□□□□□ -0.95
HMGCS1-204ENST00000507293 RAB40BQ12829 278 aa9.14□□□□□ -0.95
HMGCS1-204ENST00000507293 HNF4GQ14541 408 aa9.14□□□□□ -0.95
HMGCS1-204ENST00000507293 RSU1Q15404 277 aa9.14□□□□□ -0.95
HMGCS1-204ENST00000507293 ZFP1Q6P2D0 407 aa9.14□□□□□ -0.95
HMGCS1-204ENST00000507293 OR8H3Q8N146 312 aa9.14□□□□□ -0.95
HMGCS1-204ENST00000507293 RHOXF1Q8NHV9 184 aa9.14□□□□□ -0.95
HMGCS1-204ENST00000507293 Q96MT0 163 aa9.14□□□□□ -0.95
HMGCS1-204ENST00000507293 NOL4LQ96MY1 436 aaPredicted RBP9.14□□□□□ -0.95
HMGCS1-204ENST00000507293 LINC00574Q9H8X3 128 aa9.14□□□□□ -0.95
HMGCS1-204ENST00000507293 ZNF581Q9P0T4 197 aa9.14□□□□□ -0.95
HMGCS1-204ENST00000507293 A0A1W2PPE3 182 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 SERPINE3A8MV23 424 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 HSD17B6O14756 317 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 CDRT1O95170 752 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 IGKV1D-33P01593 117 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 IGKV1-33P01594 117 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 LIMS3P0CW19 117 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 LIMS4P0CW20 117 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 RAB7AP51149 207 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 PAX5Q02548 391 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 XAF1Q6GPH4 301 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 ASCL4Q6XD76 172 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 C18orf65Q6ZTR6 163 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 MRPL41Q8IXM3 137 aaKnown RBP9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 SUMF2Q8NBJ7 301 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 Q8NFD4 153 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 OR10A7Q8NGE5 316 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 OR51D1Q8NGF3 324 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 OR10X1Q8NGY0 326 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 HAVCR2Q8TDQ0 301 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 CHPT1Q8WUD6 406 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 APH1BQ8WW43 257 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 DPF1Q92782 380 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 C9orf16Q9BUW7 83 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 DPCDQ9BVM2 203 aaPredicted RBP9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 MRPS18AQ9NVS2 196 aaKnown RBP9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 LINC00527Q9UJ94 153 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 ING4Q9UNL4 249 aa9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 RPL36Q9Y3U8 105 aaKnown RBP9.13□□□□□ -0.95
HMGCS1-204ENST00000507293 LOC100130705A0A1B0GUX0 176 aa9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 NUDT19A8MXV4 375 aa9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 FGF16O43320 207 aa9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 OR7C1O76099 320 aaPredicted RBP9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 CD2P06729 351 aa9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 THBS3P49746 956 aa9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 RBM11P57052 281 aaKnown RBP9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 EGFEM1PQ0D2K5 195 aa9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 DEFB121Q5J5C9 76 aa9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 VAX1Q5SQQ9 334 aa9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 C11orf87Q6NUJ2 197 aa9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 SLC16A12Q6ZSM3 486 aa9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 C8orf86Q6ZUL3 223 aa9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 OR2W3Q7Z3T1 314 aa9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 SLC35E3Q7Z769 313 aa9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 GPR148Q8TDV2 347 aa9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 SLC29A1Q99808 456 aa9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 GPR61Q9BZJ8 451 aa9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 METTL9Q9H1A3 318 aa9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 FAM118AQ9NWS6 357 aa9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 ST3GAL6Q9Y274 331 aa9.12□□□□□ -0.95
HMGCS1-204ENST00000507293 IGHV3-72A0A0B4J1Y9 119 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 IGHV1-3A0A0C4DH29 117 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 TMEM30CPA0ZSE6 113 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 CSTBP04080 98 aaKnown RBP9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 SERPINA2P20848 420 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 REG1BP48304 166 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 PPP3R1P63098 170 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 SLC35B1P78383 322 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 ZNF816Q0VGE8 651 aaPredicted RBP9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 SMN1Q16637 294 aaKnown RBP9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 KLHL22Q53GT1 634 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 NHLRC3Q5JS37 347 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 DDI2Q5TDH0 399 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 OR2G6Q5TZ20 316 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 RPL22L1Q6P5R6 122 aaKnown RBP9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 MOB3BQ86TA1 216 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 FOXRED2Q8IWF2 684 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms