RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 Q3ZCU0 254 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 FBLN7Q53RD9 439 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 RSBN1Q5VWQ0 802 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 OSR2Q8N2R0 312 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 WFDC9Q8NEX5 89 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 OR51A2Q8NGJ7 313 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 OR52M1Q8NGK5 317 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 OR52N1Q8NH53 320 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 MRPS24Q96EL2 167 aaKnown RBP11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 OR5M11Q96RB7 305 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 NECAP2Q9NVZ3 263 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 ING3Q9NXR8 418 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 TAS2R4Q9NYW5 299 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 ST3GAL6Q9Y274 331 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 TMEM30CPA0ZSE6 113 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 FAM90A18PA6NE21 464 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 FAM90A16PA6NEW6 464 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 FAM90A20PA6NIJ5 464 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 FAM90A9PA6NNJ1 464 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 FAM90A12PA8MX19 464 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 FAM90A5PA8MXJ8 464 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 FGF16O43320 207 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 WBP4O75554 376 aaKnown RBP11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 GPX5O75715 221 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 OR7C1O76099 320 aaPredicted RBP11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 FAM90A15PP0C7V4 464 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 FAM90A13PP0C7W8 464 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 FAM90A14PP0C7W9 464 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 FAM90A24PP0C7X0 464 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 GTF2F2P13984 249 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 SLC6A1P30531 599 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 GTF2A1P52655 376 aaPredicted RBP11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 RIPK1Q13546 671 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 RBM39Q14498 530 aaKnown RBP11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 ABCA11PQ4W5N1 156 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 YIF1BQ5BJH7 314 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 DDI2Q5TDH0 399 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 RNF144BQ7Z419 303 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 CDH26Q8IXH8 852 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 STX19Q8N4C7 294 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 TMEM80Q96HE8 168 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 DPCDQ9BVM2 203 aaPredicted RBP11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 GPR61Q9BZJ8 451 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 PPIL3Q9H2H8 161 aaKnown RBP11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 ING4Q9UNL4 249 aa11.52□□□□□ -0.57
HMGCS1-203ENST00000507004 TCRBV4S1A1TA0A5B7 111 aa11.51□□□□□ -0.57
HMGCS1-203ENST00000507004 ADARB2-AS1A8MUL3 147 aa11.51□□□□□ -0.57
HMGCS1-203ENST00000507004 HSPB6O14558 160 aa11.51□□□□□ -0.57
HMGCS1-203ENST00000507004 LPLP06858 475 aa11.51□□□□□ -0.57
HMGCS1-203ENST00000507004 JUNBP17275 347 aaPredicted RBP11.51□□□□□ -0.57
HMGCS1-203ENST00000507004 CD33P20138 364 aa11.51□□□□□ -0.57
HMGCS1-203ENST00000507004 IL3RAP26951 378 aa11.51□□□□□ -0.57
HMGCS1-203ENST00000507004 GDNFP39905 211 aa11.51□□□□□ -0.57
HMGCS1-203ENST00000507004 RBM11P57052 281 aaKnown RBP11.51□□□□□ -0.57
HMGCS1-203ENST00000507004 Q499Y3 187 aa11.51□□□□□ -0.57
HMGCS1-203ENST00000507004 BAIAP2L2Q6UXY1 529 aa11.51□□□□□ -0.57
HMGCS1-203ENST00000507004 Q6ZS46 218 aa11.51□□□□□ -0.57
HMGCS1-203ENST00000507004 COMMD1Q8N668 190 aa11.51□□□□□ -0.57
HMGCS1-203ENST00000507004 C8orf31Q8N9H6 132 aa11.51□□□□□ -0.57
HMGCS1-203ENST00000507004 SUMF2Q8NBJ7 301 aa11.51□□□□□ -0.57
HMGCS1-203ENST00000507004 OR13A1Q8NGR1 328 aa11.51□□□□□ -0.57
HMGCS1-203ENST00000507004 OR10X1Q8NGY0 326 aa11.51□□□□□ -0.57
HMGCS1-203ENST00000507004 RGP1Q92546 391 aaPredicted RBP11.51□□□□□ -0.57
HMGCS1-203ENST00000507004 CMYA5Q8N3K9 4069 aa11.5□□□□□ -0.57
HMGCS1-203ENST00000507004 TRBV5-5A0A0J9YX44 114 aa11.5□□□□□ -0.57
HMGCS1-203ENST00000507004 FAM172BPA6NC97 362 aa11.5□□□□□ -0.57
HMGCS1-203ENST00000507004 EFCAB10A6NFE3 127 aa11.5□□□□□ -0.57
HMGCS1-203ENST00000507004 ORC5O43913 435 aa11.5□□□□□ -0.57
HMGCS1-203ENST00000507004 CA11O75493 328 aa11.5□□□□□ -0.57
HMGCS1-203ENST00000507004 PF4P02776 101 aa11.5□□□□□ -0.57
HMGCS1-203ENST00000507004 FSTP19883 344 aa11.5□□□□□ -0.57
HMGCS1-203ENST00000507004 ETV1P50549 477 aa11.5□□□□□ -0.57
HMGCS1-203ENST00000507004 SLC35A2P78381 396 aa11.5□□□□□ -0.57
HMGCS1-203ENST00000507004 PIGYQ3MUY2 71 aa11.5□□□□□ -0.57
HMGCS1-203ENST00000507004 OR2G6Q5TZ20 316 aa11.5□□□□□ -0.57
HMGCS1-203ENST00000507004 LYG1Q8N1E2 194 aa11.5□□□□□ -0.57
HMGCS1-203ENST00000507004 DHRSXQ8N5I4 330 aa11.5□□□□□ -0.57
HMGCS1-203ENST00000507004 MRGPRDQ8TDS7 321 aa11.5□□□□□ -0.57
HMGCS1-203ENST00000507004 CHPT1Q8WUD6 406 aa11.5□□□□□ -0.57
HMGCS1-203ENST00000507004 SGCDQ92629 289 aa11.5□□□□□ -0.57
HMGCS1-203ENST00000507004 CNOT2Q9NZN8 540 aaKnown RBP11.5□□□□□ -0.57
HMGCS1-203ENST00000507004 PSG11Q9UQ72 335 aa11.5□□□□□ -0.57
HMGCS1-203ENST00000507004 CCRL2O00421 344 aa11.49□□□□□ -0.57
HMGCS1-203ENST00000507004 GAPDHP04406 335 aaKnown RBP11.49□□□□□ -0.57
HMGCS1-203ENST00000507004 CD1AP06126 327 aa11.49□□□□□ -0.57
HMGCS1-203ENST00000507004 TMEM11P17152 192 aa11.49□□□□□ -0.57
HMGCS1-203ENST00000507004 IGFBP3P17936 291 aaPredicted RBP11.49□□□□□ -0.57
HMGCS1-203ENST00000507004 CD24P25063 80 aa11.49□□□□□ -0.57
HMGCS1-203ENST00000507004 SLC35B1P78383 322 aa11.49□□□□□ -0.57
HMGCS1-203ENST00000507004 ZNF816Q0VGE8 651 aaPredicted RBP11.49□□□□□ -0.57
HMGCS1-203ENST00000507004 SMN1Q16637 294 aaKnown RBP11.49□□□□□ -0.57
HMGCS1-203ENST00000507004 TMEM95Q3KNT9 176 aa11.49□□□□□ -0.57
HMGCS1-203ENST00000507004 DMKNQ6E0U4 476 aaPredicted RBP11.49□□□□□ -0.57
HMGCS1-203ENST00000507004 TRAT1Q6PIZ9 186 aa11.49□□□□□ -0.57
HMGCS1-203ENST00000507004 LINC00311Q8N616 119 aa11.49□□□□□ -0.57
HMGCS1-203ENST00000507004 OR51D1Q8NGF3 324 aa11.49□□□□□ -0.57
HMGCS1-203ENST00000507004 OR10K1Q8NGX5 313 aa11.49□□□□□ -0.57
HMGCS1-203ENST00000507004 PLPPR1Q8TBJ4 325 aa11.49□□□□□ -0.57
HMGCS1-203ENST00000507004 GHSRQ92847 366 aa11.49□□□□□ -0.57
HMGCS1-203ENST00000507004 RCC1LQ96I51 464 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms