RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 COQ8AQ8NI60 647 aa10.31□□□□□ -0.76
LIN54-206ENST00000506560 PARP12Q9H0J9 701 aaKnown RBP10.31□□□□□ -0.76
LIN54-206ENST00000506560 MSGN1A6NI15 193 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 RPA2P15927 270 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 RAB32Q13637 225 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 SNTB1Q13884 538 aaKnown RBP10.3□□□□□ -0.76
LIN54-206ENST00000506560 ZNF718Q3SXZ3 478 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 TIMM23BQ5SRD1 257 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 WDR82Q6UXN9 313 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 SPERTQ8NA61 448 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 IL1F10Q8WWZ1 152 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 KIRREL1Q96J84 757 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 TP53RKQ96S44 253 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 USB1Q9BQ65 265 aaKnown RBP10.3□□□□□ -0.76
LIN54-206ENST00000506560 BCL2L14Q9BZR8 327 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 OR1A1Q9P1Q5 309 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 SLC34A2O95436 690 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 KITLGP21583 273 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 GCH1P30793 250 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 GLP1RP43220 463 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 IL13RA2Q14627 380 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 ABCA11PQ4W5N1 156 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 ZNF818PQ6ZRF7 136 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 LYZL2Q7Z4W2 148 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 SGPP2Q8IWX5 399 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 TPRX1Q8N7U7 411 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 RELL2Q8NC24 303 aaPredicted RBP10.3□□□□□ -0.76
LIN54-206ENST00000506560 OR2Z1Q8NG97 314 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 VRK1Q99986 396 aaPredicted RBP10.3□□□□□ -0.76
LIN54-206ENST00000506560 AMDHD2Q9Y303 409 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 ATP23Q9Y6H3 246 aa10.3□□□□□ -0.76
LIN54-206ENST00000506560 USF3Q68DE3 2245 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 hCG_1807616A0A1W2PRN6 198 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 TRDCB7Z8K6 153 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 TNFSF12O43508 249 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 PTBP3O95758 552 aaKnown RBP10.29□□□□□ -0.76
LIN54-206ENST00000506560 RLN2P04090 185 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 PSMB6P28072 239 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 PMELP40967 661 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 HERV-K104P61576 105 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 TMEM187Q14656 261 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 RGS7BPQ6MZT1 257 aaPredicted RBP10.29□□□□□ -0.76
LIN54-206ENST00000506560 GALNT11Q8NCW6 608 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 GLYATL2Q8WU03 294 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 SFXN3Q9BWM7 321 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 PLK3Q9H4B4 646 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 NAA60Q9H7X0 242 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 RAB18Q9NP72 206 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 RASL12Q9NYN1 266 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 ABCA4P78363 2273 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 PRRG2O14669 202 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 HSD17B6O14756 317 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 EGR1P18146 543 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 GGNBP1Q5YKI7 109 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 POC1AQ8NBT0 407 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 RBPMSQ93062 196 aaKnown RBP10.29□□□□□ -0.76
LIN54-206ENST00000506560 CCL28Q9NRJ3 127 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 POLDIP2Q9Y2S7 368 aa10.29□□□□□ -0.76
LIN54-206ENST00000506560 DSCAMO60469 2012 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 RP2O75695 350 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 HAND1O96004 215 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 KCNJ3P48549 501 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 IL15RAQ13261 267 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 SPIN3Q5JUX0 258 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 FAM74A1Q5RGS3 127 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 MBNL2Q5VZF2 373 aaKnown RBP10.28□□□□□ -0.76
LIN54-206ENST00000506560 GAPTQ8N292 157 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 NMES1Q9C002 83 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 ESRP2Q9H6T0 727 aaKnown RBP10.28□□□□□ -0.76
LIN54-206ENST00000506560 PHF1O43189 567 aaPredicted RBP10.28□□□□□ -0.76
LIN54-206ENST00000506560 SLC25A4P12235 298 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 S100A10P60903 97 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 ZNF146Q15072 292 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 IAH1Q2TAA2 248 aaPredicted RBP10.28□□□□□ -0.76
LIN54-206ENST00000506560 FAM201AQ5SY85 155 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 MEX3BQ6ZN04 569 aaKnown RBP10.28□□□□□ -0.76
LIN54-206ENST00000506560 BOLLQ8N9W6 283 aaKnown RBP10.28□□□□□ -0.76
LIN54-206ENST00000506560 THAP6Q8TBB0 222 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 DCUN1D4Q92564 292 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 MSI2Q96DH6 328 aaKnown RBP10.28□□□□□ -0.76
LIN54-206ENST00000506560 MUCL1Q96DR8 90 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 CXorf58Q96LI9 332 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 RSRP1Q9BUV0 290 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 CXXC4Q9H2H0 198 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 HES4Q9HCC6 221 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 TREM2Q9NZC2 230 aa10.28□□□□□ -0.76
LIN54-206ENST00000506560 A0A0B4J2A0 478 aa10.27□□□□□ -0.76
LIN54-206ENST00000506560 TK1P04183 234 aa10.27□□□□□ -0.76
LIN54-206ENST00000506560 NKX6-1P78426 367 aaPredicted RBP10.27□□□□□ -0.76
LIN54-206ENST00000506560 UNQ6126/PRO20091Q6UXV3 157 aa10.27□□□□□ -0.76
LIN54-206ENST00000506560 Q6ZS49 121 aa10.27□□□□□ -0.76
LIN54-206ENST00000506560 TMEM171Q8WVE6 324 aa10.27□□□□□ -0.76
LIN54-206ENST00000506560 LINC00052Q96N35 136 aa10.27□□□□□ -0.76
LIN54-206ENST00000506560 SPACA1Q9HBV2 294 aa10.27□□□□□ -0.76
LIN54-206ENST00000506560 C1orf123Q9NWV4 160 aa10.27□□□□□ -0.76
LIN54-206ENST00000506560 SHPKQ9UHJ6 478 aa10.27□□□□□ -0.76
LIN54-206ENST00000506560 SPRY3O43610 288 aa10.27□□□□□ -0.77
LIN54-206ENST00000506560 TUSC2O75896 110 aa10.27□□□□□ -0.77
LIN54-206ENST00000506560 CRYAAP02489 173 aa10.27□□□□□ -0.77
LIN54-206ENST00000506560 LUMP51884 338 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms