RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 AIF1LQ9BQI0 150 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 DOHHQ9BU89 302 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 ANGPTL4Q9BY76 406 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 FRMD8P1Q9BZ68 369 aaPredicted RBP3.6□□□□□ -1.83
HERC4-213ENST00000506515 ACTR3CQ9C0K3 210 aaPredicted RBP3.6□□□□□ -1.83
HERC4-213ENST00000506515 C12orf10Q9HB07 376 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 PRTFDC1Q9NRG1 225 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 C20orf96Q9NUD7 363 aaPredicted RBP3.6□□□□□ -1.83
HERC4-213ENST00000506515 MS4A12Q9NXJ0 267 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 PAQR5Q9NXK6 330 aaPredicted RBP3.6□□□□□ -1.83
HERC4-213ENST00000506515 USF3Q68DE3 2245 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 FREM3P0C091 2139 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 BTNL10A8MVZ5 291 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 L7N2F9 121 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 SCAMP2O15127 329 aaKnown RBP3.59□□□□□ -1.83
HERC4-213ENST00000506515 CCNB2O95067 398 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 PRB2P02812 416 aaPredicted RBP3.59□□□□□ -1.83
HERC4-213ENST00000506515 MPC1LP0DKB6 136 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 AP1S2P56377 157 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 LOXL1Q08397 574 aaPredicted RBP3.59□□□□□ -1.83
HERC4-213ENST00000506515 DEFB134Q4QY38 66 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 LINC00483Q53H64 154 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 CLEC2AQ6UVW9 174 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 Q6ZR03 302 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 RIMKLAQ8IXN7 391 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 KATNAL2Q8IYT4 538 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 RPRMLQ8N4K4 120 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 OTUD6BQ8N6M0 293 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 NT5CQ8TCD5 201 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 TMEM230Q96A57 120 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 CCDC42Q96M95 316 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 COL21A1Q96P44 957 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 IL22Q9GZX6 179 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 SPNS1Q9H2V7 528 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 SAV1Q9H4B6 383 aaPredicted RBP3.59□□□□□ -1.83
HERC4-213ENST00000506515 CFL2Q9Y281 166 aa3.59□□□□□ -1.83
HERC4-213ENST00000506515 ROS1P08922 2347 aa3.59□□□□□ -1.84
HERC4-213ENST00000506515 CUBNO60494 3623 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 HRNRQ86YZ3 2850 aaPredicted RBP3.58□□□□□ -1.84
HERC4-213ENST00000506515 ANK2Q01484 3957 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 A0A087X0T9 212 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 IGKV3D-11A0A0A0MRZ8 115 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 NDUFS8O00217 210 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 OR1I1O60431 355 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 RP2O75695 350 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 RHOXF2BP0C7M4 288 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 FAM228BP0C875 321 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 CT45A6P0DMU7 189 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 CT45A5P0DMU8 189 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 CT45A7P0DMV0 189 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 IGHV1-8P0DP01 117 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 ANXA8P13928 327 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 IGFBP3P17936 291 aaPredicted RBP3.58□□□□□ -1.84
HERC4-213ENST00000506515 UGT2B10P36537 528 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 RAB9AP51151 201 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 LINC00315P59091 139 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 UBE2NP61088 152 aaKnown RBP3.58□□□□□ -1.84
HERC4-213ENST00000506515 IL18Q14116 193 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 STK11Q15831 433 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 PGGHGQ32M88 737 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 CT45A1Q5HYN5 189 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 C6orf52Q5T4I8 152 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 ANXA8L1Q5VT79 327 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 UBE2UQ5VVX9 321 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 DUPD1Q68J44 220 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 NANOGP8Q6NSW7 305 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 MRPL55Q7Z7F7 128 aaKnown RBP3.58□□□□□ -1.84
HERC4-213ENST00000506515 ZNF695Q8IW36 515 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 KIF2BQ8N4N8 673 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 OR9G4Q8NGQ1 327 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 CT45A3Q8NHU0 189 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 SYNPRQ8TBG9 265 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 APH1BQ8WW43 257 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 SEH1LQ96EE3 360 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 SNF8Q96H20 258 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 CAPZA3Q96KX2 299 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 JSRP1Q96MG2 331 aaPredicted RBP3.58□□□□□ -1.84
HERC4-213ENST00000506515 PLA2G12AQ9BZM1 189 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 OR8D2Q9GZM6 311 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 STMN4Q9H169 189 aaPredicted RBP3.58□□□□□ -1.84
HERC4-213ENST00000506515 EDA2RQ9HAV5 297 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 PARVBQ9HBI1 364 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 MYOZ1Q9NP98 299 aaPredicted RBP3.58□□□□□ -1.84
HERC4-213ENST00000506515 DYSFO75923 2080 aa3.58□□□□□ -1.84
HERC4-213ENST00000506515 IGKV2-28A0A075B6P5 120 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 IGKV1-8A0A0C4DH67 115 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 DEFB108AA8MXU0 73 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 K7EMT4 169 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 CASQ2O14958 399 aaPredicted RBP3.57□□□□□ -1.84
HERC4-213ENST00000506515 RAD51CO43502 376 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 IGKV2D-28P01615 120 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 FGF4P08620 206 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 CD3GP09693 182 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 OR8G3PP0DMU2 310 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 OGNP20774 298 aaKnown RBP3.57□□□□□ -1.84
HERC4-213ENST00000506515 GSTM3P21266 225 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 PSMB5P28074 263 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 DNASE1L1P49184 302 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 CDK9P50750 372 aaKnown RBP3.57□□□□□ -1.84
HERC4-213ENST00000506515 HADHBP55084 474 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms