RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 IFNL4K9M1U5 179 aa14.65□□□□□ -0.06
TRAPPC11-204ENST00000505676 BET1O15155 118 aa14.65□□□□□ -0.06
TRAPPC11-204ENST00000505676 DEDDO75618 318 aa14.65□□□□□ -0.06
TRAPPC11-204ENST00000505676 GNRHRP30968 328 aa14.65□□□□□ -0.06
TRAPPC11-204ENST00000505676 LUMP51884 338 aaPredicted RBP14.65□□□□□ -0.06
TRAPPC11-204ENST00000505676 H1FOOQ8IZA3 346 aaPredicted RBP14.65□□□□□ -0.06
TRAPPC11-204ENST00000505676 GLYATL2Q8WU03 294 aa14.65□□□□□ -0.06
TRAPPC11-204ENST00000505676 TMEM56Q96MV1 263 aa14.65□□□□□ -0.06
TRAPPC11-204ENST00000505676 TMEM222Q9H0R3 208 aa14.65□□□□□ -0.06
TRAPPC11-204ENST00000505676 MBNL3Q9NUK0 354 aaKnown RBP14.65□□□□□ -0.06
TRAPPC11-204ENST00000505676 TAAR3PQ9P1P4 343 aa14.65□□□□□ -0.06
TRAPPC11-204ENST00000505676 OR2W1Q9Y3N9 320 aa14.65□□□□□ -0.06
TRAPPC11-204ENST00000505676 TMEM56-RWDD3S4R434 201 aa14.65□□□□□ -0.06
TRAPPC11-204ENST00000505676 PRRG2O14669 202 aa14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 PHF1O43189 567 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 HERPUD1Q15011 391 aa14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 EIF5AL1Q6IS14 154 aaKnown RBP14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 FAM90A1Q86YD7 464 aa14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 AKR1E2Q96JD6 320 aa14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 C1QTNF6Q9BXI9 259 aa14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 PRR13Q9NZ81 148 aa14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 MPTX1A8MV57 137 aa14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 HSPB6O14558 160 aa14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 MLNRO43193 412 aa14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 HAND1O96004 215 aa14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 CRYAAP02489 173 aa14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 S100A10P60903 97 aa14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 ZNF474Q6S9Z5 364 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 PCSK4Q6UW60 755 aa14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 EIF4E3Q8N5X7 224 aaKnown RBP14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 OR10Z1Q8NGY1 313 aa14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 MRPL24Q96A35 216 aaKnown RBP14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 TINAGQ9UJW2 476 aa14.64□□□□□ -0.07
TRAPPC11-204ENST00000505676 E5RGE8 158 aa14.63□□□□□ -0.07
TRAPPC11-204ENST00000505676 PTBP3O95758 552 aaKnown RBP14.63□□□□□ -0.07
TRAPPC11-204ENST00000505676 GRPP07492 148 aa14.63□□□□□ -0.07
TRAPPC11-204ENST00000505676 CD200P41217 278 aa14.63□□□□□ -0.07
TRAPPC11-204ENST00000505676 FOXC1Q12948 553 aa14.63□□□□□ -0.07
TRAPPC11-204ENST00000505676 SNTB1Q13884 538 aaKnown RBP14.63□□□□□ -0.07
TRAPPC11-204ENST00000505676 SMIM21Q3B7S5 101 aa14.63□□□□□ -0.07
TRAPPC11-204ENST00000505676 ALKBH6Q3KRA9 238 aa14.63□□□□□ -0.07
TRAPPC11-204ENST00000505676 SPACA3Q8IXA5 215 aa14.63□□□□□ -0.07
TRAPPC11-204ENST00000505676 NSG2Q9Y328 171 aa14.63□□□□□ -0.07
TRAPPC11-204ENST00000505676 CNOT1A5YKK6 2376 aaKnown RBP14.63□□□□□ -0.07
TRAPPC11-204ENST00000505676 TMEM30CPA0ZSE6 113 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 H0Y980 276 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 K7ENP7 123 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 ZNF250P15622 560 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 GLRXP35754 106 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 PAX5Q02548 391 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 AANATQ16613 207 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 SLC35E4Q6ICL7 350 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 HSD17B13Q7Z5P4 300 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 MRGPRGQ86SM5 289 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 BAP18Q8IXM2 172 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 FAM71E2Q8N5Q1 922 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 BVESQ8NE79 360 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 OR1S1Q8NH92 325 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 SECTM1Q8WVN6 248 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 ELOVL5Q9NYP7 299 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 OR5AC2Q9NZP5 309 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 TRAPPC2LQ9UL33 140 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 UBE2J1Q9Y385 318 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 UCP1P25874 307 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 CFHR2P36980 270 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 HMGN3Q15651 99 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 TBC1D26Q86UD7 250 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 RBPMSQ93062 196 aaKnown RBP14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 ABHD17AQ96GS6 310 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 KCNIP1Q9NZI2 227 aa14.62□□□□□ -0.07
TRAPPC11-204ENST00000505676 IGKV1-6A0A0C4DH72 117 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 K7EPK0 472 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 SIRPB1O00241 398 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 IGHV3-13P01766 116 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 GAPDHP04406 335 aaKnown RBP14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 GLI4P10075 376 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 P2RX3P56373 397 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 GPR157Q5UAW9 335 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 THOC7Q6I9Y2 204 aaKnown RBP14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 TRAT1Q6PIZ9 186 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 ACP7Q6ZNF0 438 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 ZNF695Q8IW36 515 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 C11orf53Q8IXP5 236 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 OR5D13Q8NGL4 314 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 FAM216AQ8WUB2 273 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 S100PBPQ96BU1 408 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 MFSD2BA6NFX1 497 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 H0YL77 283 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 TDGF1P3P51864 188 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 UCNP55089 124 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 MSMO1Q15800 293 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 TOR2AQ5JU69 321 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 CCDC28AQ8IWP9 274 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 OR11L1Q8NGX0 322 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 RRNAD1Q96FB5 475 aaKnown RBP14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 SDHAF2Q9NX18 166 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 MSRB2Q9Y3D2 182 aa14.61□□□□□ -0.07
TRAPPC11-204ENST00000505676 CLEC18AA5D8T8 446 aa14.6□□□□□ -0.07
TRAPPC11-204ENST00000505676 A6NLC8 198 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms