RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 LGALS9CQ6DKI2 356 aa5.31□□□□□ -1.56
VCAN-206ENST00000505615 CEMP1Q6PRD7 247 aaPredicted RBP5.31□□□□□ -1.56
VCAN-206ENST00000505615 CYP4Z1Q86W10 505 aa5.31□□□□□ -1.56
VCAN-206ENST00000505615 ANGPTL5Q86XS5 388 aa5.31□□□□□ -1.56
VCAN-206ENST00000505615 ZNF573Q86YE8 665 aa5.31□□□□□ -1.56
VCAN-206ENST00000505615 IZUMO1Q8IYV9 350 aa5.31□□□□□ -1.56
VCAN-206ENST00000505615 FAM86B1Q8N7N1 296 aa5.31□□□□□ -1.56
VCAN-206ENST00000505615 OR2T12Q8NG77 320 aa5.31□□□□□ -1.56
VCAN-206ENST00000505615 CORO2AQ92828 525 aa5.31□□□□□ -1.56
VCAN-206ENST00000505615 MNTQ99583 582 aa5.31□□□□□ -1.56
VCAN-206ENST00000505615 TXN2Q99757 166 aa5.31□□□□□ -1.56
VCAN-206ENST00000505615 TMED9Q9BVK6 235 aa5.31□□□□□ -1.56
VCAN-206ENST00000505615 TOLLIPQ9H0E2 274 aa5.31□□□□□ -1.56
VCAN-206ENST00000505615 OR51J1Q9H342 316 aa5.31□□□□□ -1.56
VCAN-206ENST00000505615 GAL3ST2Q9H3Q3 398 aa5.31□□□□□ -1.56
VCAN-206ENST00000505615 NIPAL2Q9H841 368 aa5.31□□□□□ -1.56
VCAN-206ENST00000505615 TUBA4BQ9H853 241 aa5.31□□□□□ -1.56
VCAN-206ENST00000505615 PLEKHA2Q9HB19 425 aa5.31□□□□□ -1.56
VCAN-206ENST00000505615 SEBOXQ9HB31 216 aaPredicted RBP5.31□□□□□ -1.56
VCAN-206ENST00000505615 DCAF13Q9NV06 445 aaKnown RBP5.31□□□□□ -1.56
VCAN-206ENST00000505615 SLC7A11Q9UPY5 501 aa5.31□□□□□ -1.56
VCAN-206ENST00000505615 TRGV10A0A0A0MS01 117 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 IGHV3-72A0A0B4J1Y9 119 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 FAM90A10PA6NDY2 464 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 CXorf65A6NEN9 183 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 NCBP2LA6PVI3 153 aaKnown RBP5.3□□□□□ -1.56
VCAN-206ENST00000505615 TOR1AO14656 332 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 DIRAS1O95057 198 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 HAND1O96004 215 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 NRASP01111 189 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 H2BFMP0C1H6 154 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 VDAC1P21796 283 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 GABRR1P24046 479 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 RIPPLY1Q0D2K3 151 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 SF3A3Q12874 501 aaKnown RBP eCLIP5.3□□□□□ -1.56
VCAN-206ENST00000505615 CYLC2Q14093 348 aaPredicted RBP5.3□□□□□ -1.56
VCAN-206ENST00000505615 CRMP1Q14194 572 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 C17orf58Q2M2W7 97 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 MAJINQ3KP22 176 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 ZNF684Q5T5D7 378 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 LCN1P1Q5VSP4 162 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 ERI1Q8IV48 349 aaKnown RBP5.3□□□□□ -1.56
VCAN-206ENST00000505615 PGAM4Q8N0Y7 254 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 OR8D4Q8NGM9 314 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 OR6K6Q8NGW6 343 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 OR52J3Q8NH60 311 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 OR9G1Q8NH87 305 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 TMEM106AQ96A25 262 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 OR4C12Q96R67 309 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 INTS14Q96SY0 518 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 SH3GL1Q99961 368 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 PKIBQ9C010 78 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 EGLN3Q9H6Z9 239 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 GPR173Q9NS66 373 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 MTCH1Q9NZJ7 389 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 STUB1Q9UNE7 303 aa5.3□□□□□ -1.56
VCAN-206ENST00000505615 IGKV1-27A0A075B6S5 117 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 FAM183AA6NL82 134 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 G3V318 75 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 J3QR06 171 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 LGALS1P09382 135 aaKnown RBP5.29□□□□□ -1.56
VCAN-206ENST00000505615 OR5H8P0DN80 308 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 PTGFRP43088 359 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 GLIPR1P48060 266 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 RAB7AP51149 207 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 RAB9AP51151 201 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 ZNF816Q0VGE8 651 aaPredicted RBP5.29□□□□□ -1.56
VCAN-206ENST00000505615 KLF10Q13118 480 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 MADCAM1Q13477 382 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 KPNB1Q14974 876 aaKnown RBP5.29□□□□□ -1.56
VCAN-206ENST00000505615 C19orf54Q5BKX5 351 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 CST9LP1Q5W188 147 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 ASRGL1Q7L266 308 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 LEAP2Q969E1 77 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 SAT2Q96F10 170 aaPredicted RBP5.29□□□□□ -1.56
VCAN-206ENST00000505615 COQ2Q96H96 371 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 C7orf34Q96L11 122 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 CEP19Q96LK0 163 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 S1PR3Q99500 378 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 TEAD3Q99594 435 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 SLC5A7Q9GZV3 580 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 SLC25A32Q9H2D1 315 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 FAM206AQ9NX38 181 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 ENPP5Q9UJA9 477 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.29□□□□□ -1.56
VCAN-206ENST00000505615 PIGLQ9Y2B2 252 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 KLHDC2Q9Y2U9 406 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 AMMECR1Q9Y4X0 333 aaPredicted RBP5.29□□□□□ -1.56
VCAN-206ENST00000505615 CDH10Q9Y6N8 788 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 APOBP04114 4563 aaKnown RBP5.29□□□□□ -1.56
VCAN-206ENST00000505615 LRP1BQ9NZR2 4599 aa5.29□□□□□ -1.56
VCAN-206ENST00000505615 IGHV1-3A0A0C4DH29 117 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 TCRBV5S2A0A599 114 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 ODAMA1E959 279 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 CXCR6O00574 342 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 MPZL2O60487 215 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 ENTPD6O75354 484 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 DHRS3O75911 302 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 RGS11O94810 467 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 OR2C1O95371 312 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms