RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 H7C1Q1 480 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 NDUFB3O43676 98 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 HTR3BO95264 441 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 AANATQ16613 207 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 SLC22A6Q4U2R8 563 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 OR10K2Q6IF99 312 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 FAM71F2Q6NXP2 309 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 NLRC3Q7RTR2 1065 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 LDLRAD3Q86YD5 345 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 BEND2Q8NDZ0 799 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 ST6GALNAC6Q969X2 333 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 URM1Q9BTM9 101 aaKnown RBP6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 SCPEP1Q9HB40 452 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 CLN8Q9UBY8 286 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 IGKV1-6A0A0C4DH72 117 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 CRTAPO75718 401 aaPredicted RBP6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 LY6G6DO95868 133 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 RBM39Q14498 530 aaKnown RBP6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 HERPUD1Q15011 391 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 ZNF79Q15937 498 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 FAM46BQ96A09 425 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 ARHGAP5-AS1Q96IT6 56 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 MGAT4AQ9UM21 535 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 TMPRSS2O15393 492 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 FCGR3AP08637 254 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 CDK2P24941 298 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 CNPY1Q3B7I2 92 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 HOGA1Q86XE5 327 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 ODF3L1Q8IXM7 274 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 DEDD2Q8WXF8 326 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 PTTG2Q9NZH5 202 aa6.77□□□□□ -1.33
CDC42SE2-208ENST00000505065 TMEM30CPA0ZSE6 113 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 TUSC2O75896 110 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 CD74P04233 296 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 CD99P14209 185 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 ESCO2Q56NI9 601 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 OLFML2AQ68BL7 652 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 OR5T2Q8NGG2 359 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 OR13A1Q8NGR1 328 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 TRIM63Q969Q1 353 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 GPER1Q99527 375 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 MEGF9Q9H1U4 602 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 OR6C3Q9NZP0 311 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 IGHV3-64DA0A0J9YX35 117 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 hCG_1807616A0A1W2PRN6 198 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 FUOMA2VDF0 154 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 IGHV1-8P0DP01 117 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 GNB2P62879 340 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 TAF9Q16594 264 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 SNAPC3Q92966 411 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 ZNF16P17020 682 aaPredicted RBP6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 GLIPR1P48060 266 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 TAS2R20P59543 309 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 ZNF626Q68DY1 528 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 C6orf201Q7Z4U5 140 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 GLCCI1Q86VQ1 547 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 ELL3Q9HB65 397 aaPredicted RBP6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 DNAJB11Q9UBS4 358 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 MALRD1Q5VYJ5 2156 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 TRBV6-7A0A0A0MS04 114 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 RNASEK-C17orf49H0YIS7 233 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 HPGDSO60760 199 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 ZNF205O95201 554 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 IGLV2-14P01704 120 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 PITPNAQ00169 270 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 MIDNQ504T8 468 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 LDLRAD2Q5SZI1 272 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 IDNKQ5T6J7 187 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 KIRREL1Q96J84 757 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 SESN1Q9Y6P5 492 aa6.76□□□□□ -1.33
CDC42SE2-208ENST00000505065 DNAH3Q8TD57 4116 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 FAM90A9PA6NNJ1 464 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 YPEL1O60688 119 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 MPIG6BO95866 241 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 IKZF1Q13422 519 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 GRK1Q15835 563 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 YPEL2Q96QA6 119 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 AGMATQ9BSE5 352 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 CENPVL3A0A0U1RRI6 287 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 CLPXO76031 633 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 CSTBP04080 98 aaKnown RBP6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 GZMHP20718 246 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 UBE2E1P51965 193 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 LSM3P62310 102 aaKnown RBP6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 MRPS10P82664 201 aaKnown RBP6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 KRBOX4Q5JUW0 171 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 MZT2AQ6P582 158 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 LAX1Q8IWV1 398 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 OR4M1Q8NGD0 313 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 PPP1R35Q8TAP8 253 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 PLGRKTQ9HBL7 147 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 NSD1Q96L73 2696 aaPredicted RBP6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 hADV38S2A0JD32 116 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 C12orf77C9JDV5 145 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 SIRPB1O00241 398 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 MMP23AO75900 390 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 ZNF728P0DKX0 622 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 HLA-DRB3P79483 266 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 MXD1Q05195 221 aa6.75□□□□□ -1.33
CDC42SE2-208ENST00000505065 UTF1Q5T230 341 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms