RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 SETD2Q9BYW2 2564 aaPredicted RBP4.05□□□□□ -1.76
LMNB1-208ENST00000504788 A0A087X0M5 115 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 TRBV23-1A0A0A0MS06 115 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 A0A0A6YYH2 397 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 IGKV1-6A0A0C4DH72 117 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 A0A1B0GX30 115 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 ODAMA1E959 279 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 MEIOCA2RUB1 952 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 A6NJ64 397 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 VGLL3A8MV65 326 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 DEGS1O15121 323 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 XRCC3O43542 346 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 NDUFB3O43676 98 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 HPGDSO60760 199 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 CA11O75493 328 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 FOXH1O75593 365 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 ECDO95905 644 aaPredicted RBP4.05□□□□□ -1.76
LMNB1-208ENST00000504788 PPIAL4GP0DN37 164 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 CD99P14209 185 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 ZNF44P15621 663 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 HIST1H1DP16402 221 aaKnown RBP4.05□□□□□ -1.76
LMNB1-208ENST00000504788 CCL3L1P16619 93 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 ZNF16P17020 682 aaPredicted RBP4.05□□□□□ -1.76
LMNB1-208ENST00000504788 RCC1P18754 421 aaPredicted RBP4.05□□□□□ -1.76
LMNB1-208ENST00000504788 GABRR1P24046 479 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 CDK2P24941 298 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 BLVRBP30043 206 aaPredicted RBP4.05□□□□□ -1.76
LMNB1-208ENST00000504788 ETV6P41212 452 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 GABRA2P47869 451 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 KCNJ3P48549 501 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 LOXL3P58215 753 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 GNB2P62879 340 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 MEF2CQ06413 473 aaPredicted RBP4.05□□□□□ -1.76
LMNB1-208ENST00000504788 HERPUD1Q15011 391 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 GRK1Q15835 563 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 ZNF79Q15937 498 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 CNPY1Q3B7I2 92 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 ESCO2Q56NI9 601 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 UBE2NLQ5JXB2 153 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 BAIAP2L2Q6UXY1 529 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 Q6ZS49 121 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 C1orf122Q6ZSJ8 110 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 NLRC3Q7RTR2 1065 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 SAMD12Q8N8I0 201 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 LINC01356Q8N9X3 169 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 TMEM185AQ8NFB2 350 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 OR4M1Q8NGD0 313 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 OR56B1Q8NGI3 324 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 OR5D13Q8NGL4 314 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 ACOT12Q8WYK0 555 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 TMEM186Q96B77 213 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 UPRTQ96BW1 309 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 ABHD1Q96SE0 405 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 SDHCQ99643 169 aaPredicted RBP4.05□□□□□ -1.76
LMNB1-208ENST00000504788 ZMAT3Q9HA38 289 aaKnown RBP4.05□□□□□ -1.76
LMNB1-208ENST00000504788 PCDHB16Q9NRJ7 776 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 HIF1ANQ9NWT6 349 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 AK3Q9UIJ7 227 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 KIF25Q9UIL4 384 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 PEX16Q9Y5Y5 336 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 LINC00312Q9Y6C7 94 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 V9GYH0 126 aa4.05□□□□□ -1.76
LMNB1-208ENST00000504788 LOC105371242A0A075B767 164 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 TRAV39A0A0B4J263 110 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 TRAV20A0A0B4J274 112 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 MEX3AA1L020 520 aaKnown RBP4.04□□□□□ -1.76
LMNB1-208ENST00000504788 C12orf77C9JDV5 145 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 RNASEK-C17orf49H0YIS7 233 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 F2RL2O00254 374 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 HSPB6O14558 160 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 SMAD7O15105 426 aaKnown RBP4.04□□□□□ -1.76
LMNB1-208ENST00000504788 IGLV1-47P01700 117 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 GNB3P16520 340 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 SSTR5P35346 364 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 GZMKP49863 264 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 RPL31P62899 125 aaKnown RBP4.04□□□□□ -1.76
LMNB1-208ENST00000504788 HMGN3Q15651 99 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 PAN3Q58A45 887 aaKnown RBP4.04□□□□□ -1.76
LMNB1-208ENST00000504788 LRRC10Q5BKY1 277 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 Q6ZTK2 550 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 CCDC190Q86UF4 302 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 LDLRAD3Q86YD5 345 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 KIR3DL3Q8N743 410 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 ASCC1Q8N9N2 400 aaKnown RBP4.04□□□□□ -1.76
LMNB1-208ENST00000504788 ZNF439Q8NDP4 499 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 ZNF596Q8TC21 504 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 GCDHQ92947 438 aaPredicted RBP4.04□□□□□ -1.76
LMNB1-208ENST00000504788 SNAPC3Q92966 411 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 KIRREL1Q96J84 757 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 S100A13Q99584 98 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 OCSTAMPQ9BR26 566 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 DCUN1D5Q9BTE7 237 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 URM1Q9BTM9 101 aaKnown RBP4.04□□□□□ -1.76
LMNB1-208ENST00000504788 TOLLIPQ9H0E2 274 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 AUNIPQ9H7T9 357 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 SPACA1Q9HBV2 294 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 LPAR2Q9HBW0 351 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 BATF3Q9NR55 127 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 TMEM160Q9NX00 188 aa4.04□□□□□ -1.76
LMNB1-208ENST00000504788 COMMD3Q9UBI1 195 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms