RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 TMED4Q7Z7H5 227 aa8.34□□□□□ -1.07
PDLIM5-207ENST00000503974 SAXO1Q8IYX7 474 aa8.34□□□□□ -1.07
PDLIM5-207ENST00000503974 CMTM4Q8IZR5 234 aa8.34□□□□□ -1.07
PDLIM5-207ENST00000503974 ZSCAN4Q8NAM6 433 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-207ENST00000503974 NUP43Q8NFH3 380 aa8.34□□□□□ -1.07
PDLIM5-207ENST00000503974 GEMIN6Q8WXD5 167 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-207ENST00000503974 RAB40AQ8WXH6 277 aa8.34□□□□□ -1.07
PDLIM5-207ENST00000503974 HARBI1Q96MB7 349 aa8.34□□□□□ -1.07
PDLIM5-207ENST00000503974 SMDT1Q9H4I9 107 aa8.34□□□□□ -1.07
PDLIM5-207ENST00000503974 SRD5A3Q9H8P0 318 aa8.34□□□□□ -1.07
PDLIM5-207ENST00000503974 ACER3Q9NUN7 267 aa8.34□□□□□ -1.07
PDLIM5-207ENST00000503974 UQCR10Q9UDW1 63 aa8.34□□□□□ -1.07
PDLIM5-207ENST00000503974 CGGBP1Q9UFW8 167 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-207ENST00000503974 NAT8Q9UHE5 227 aa8.34□□□□□ -1.07
PDLIM5-207ENST00000503974 PAM16Q9Y3D7 125 aa8.34□□□□□ -1.07
PDLIM5-207ENST00000503974 NUP214P35658 2090 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-207ENST00000503974 ANKRD11Q6UB99 2663 aaPredicted RBP8.34□□□□□ -1.08
PDLIM5-207ENST00000503974 NINQ8N4C6 2090 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 SHISA8B8ZZ34 492 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 ZNF354AO60765 605 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 TRAPPC6AO75865 159 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 ITGB2P05107 769 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 GNB3P16520 340 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 AKR1C4P17516 323 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 OMGP23515 440 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 FAUP35544 74 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 GPR6P46095 362 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 SLC25A1P53007 311 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 CRYBA2P53672 197 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 PAFAH1B2P68402 229 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 SRPXP78539 464 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 SMAGPQ0VAQ4 97 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 GNMTQ14749 295 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 COX19Q49B96 90 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 TOMM20LQ6UXN7 152 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 ZNF101Q8IZC7 436 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 GPR119Q8TDV5 335 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 APOBEC4Q8WW27 367 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 MRAP2Q96G30 205 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 SEC22AQ96IW7 307 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 SLC25A21Q9BQT8 299 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 ZNF649Q9BS31 505 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 PRORYQ9H606 182 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 MRPS16Q9Y3D3 137 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 ACACBO00763 2458 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 EXPH5Q8NEV8 1989 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 IFNL4K9M1U5 179 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 TLX2O43763 284 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 NKX2-2O95096 273 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 ZNF205O95201 554 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 HMGN2P05204 90 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 SOAT1P35610 550 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 PPICP45877 212 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 P2RY6Q15077 328 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 ELOA3BQ3SY89 546 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 ZNF621Q6ZSS3 439 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 C20orf196Q8IYI0 205 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 OR8I2Q8N0Y5 310 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 C17orf78Q8N4C9 275 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 CDRT4Q8N9R6 151 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 SUMF2Q8NBJ7 301 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 ELOA3Q8NG57 546 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 MS4A10Q96PG2 267 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 DEFB126Q9BYW3 111 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 TMEM242Q9NWH2 141 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 ZNF581Q9P0T4 197 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 JPT1Q9UK76 154 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 CDC42EP3Q9UKI2 254 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 PSG8Q9UQ74 426 aa8.33□□□□□ -1.08
PDLIM5-207ENST00000503974 IGHV1-69-2A0A0G2JMI3 117 aa8.32□□□□□ -1.08
PDLIM5-207ENST00000503974 GXYLT2A0PJZ3 443 aa8.32□□□□□ -1.08
PDLIM5-207ENST00000503974 FRG2CA6NGY1 282 aa8.32□□□□□ -1.08
PDLIM5-207ENST00000503974 CT45A8P0DMV1 189 aa8.32□□□□□ -1.08
PDLIM5-207ENST00000503974 CT45A9P0DMV2 189 aa8.32□□□□□ -1.08
PDLIM5-207ENST00000503974 GPR12P47775 334 aa8.32□□□□□ -1.08
PDLIM5-207ENST00000503974 HNRNPA3P51991 378 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-207ENST00000503974 TAS2R41P59536 307 aa8.32□□□□□ -1.08
PDLIM5-207ENST00000503974 PGGHGQ32M88 737 aa8.32□□□□□ -1.08
PDLIM5-207ENST00000503974 MIDNQ504T8 468 aa8.32□□□□□ -1.08
PDLIM5-207ENST00000503974 TM4SF20Q53R12 229 aa8.32□□□□□ -1.08
PDLIM5-207ENST00000503974 CT45A2Q5DJT8 189 aa8.32□□□□□ -1.08
PDLIM5-207ENST00000503974 IGFL2Q6UWQ7 119 aa8.32□□□□□ -1.08
PDLIM5-207ENST00000503974 DNM1P46Q6ZS02 220 aa8.32□□□□□ -1.08
PDLIM5-207ENST00000503974 C5orf17Q8NAS9 161 aa8.32□□□□□ -1.08
PDLIM5-207ENST00000503974 PKIBQ9C010 78 aa8.32□□□□□ -1.08
PDLIM5-207ENST00000503974 NXF5Q9H1B4 397 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-207ENST00000503974 SRA1Q9HD15 236 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-207ENST00000503974 OR51B2Q9Y5P1 312 aa8.32□□□□□ -1.08
PDLIM5-207ENST00000503974 TRAV25A0A0B4J276 109 aa8.31□□□□□ -1.08
PDLIM5-207ENST00000503974 TRBV2A0A0J9YWF9 115 aa8.31□□□□□ -1.08
PDLIM5-207ENST00000503974 H7BYZ3 331 aa8.31□□□□□ -1.08
PDLIM5-207ENST00000503974 HSD17B6O14756 317 aa8.31□□□□□ -1.08
PDLIM5-207ENST00000503974 PDE6DO43924 150 aa8.31□□□□□ -1.08
PDLIM5-207ENST00000503974 CNIH1O95406 144 aa8.31□□□□□ -1.08
PDLIM5-207ENST00000503974 PNMTP11086 282 aa8.31□□□□□ -1.08
PDLIM5-207ENST00000503974 FUT3P21217 361 aa8.31□□□□□ -1.08
PDLIM5-207ENST00000503974 PPIBP23284 216 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-207ENST00000503974 CD34P28906 385 aa8.31□□□□□ -1.08
PDLIM5-207ENST00000503974 CTRLP40313 264 aa8.31□□□□□ -1.08
PDLIM5-207ENST00000503974 TBR1Q16650 682 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms