RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 KNL1Q8NG31 2342 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 AKAP13Q12802 2813 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 A0A1W2PPC4 97 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 TMEM250H0YL14 139 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 TP53I11O14683 189 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 TLX3O43711 291 aaPredicted RBP9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 VDAC1P21796 283 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 FKBP2P26885 142 aaKnown RBP9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 MSX1P28360 303 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 NPBWR2P48146 333 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 CCR5P51681 352 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 DYNLT3P51808 116 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 C17orf67Q0P5P2 114 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 HERPUD1Q15011 391 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 TMEM211Q6ICI0 200 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 C6orf201Q7Z4U5 140 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 UEVLDQ8IX04 471 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 CADM4Q8NFZ8 388 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 CA5BP1Q8WTZ4 195 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 ZNF845Q96IR2 970 aaPredicted RBP9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 PLK3Q9H4B4 646 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 CALHM2Q9HA72 323 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 PRSS50Q9UI38 385 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 HS3ST3A1Q9Y663 406 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 EPG5Q9HCE0 2579 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 IGKV1D-8A0A087WSZ0 117 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 IGKV1D-43A0A0B4J1Z2 117 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 VSTM2BA6NLU5 285 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 H7BYZ3 331 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 DDAH2O95865 285 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 HRASP01112 189 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 GUCA1AP43080 201 aaPredicted RBP9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 OR3A1P47881 315 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 IDH3GP51553 393 aaPredicted RBP9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 ZFP36L1Q07352 338 aaKnown RBP9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 CLN3Q13286 438 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 ACTL10Q5JWF8 245 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 SLC25A47Q6Q0C1 308 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 Q6ZS49 121 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 FAM57BQ71RH2 274 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 SLC22A18ASQ8N1D0 253 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 D2HGDHQ8N465 521 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 OR13H1Q8NG92 308 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 OR51G1Q8NGK1 321 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 OR5L1Q8NGL2 311 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 RAB40CQ96S21 281 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 TMEM208Q9BTX3 173 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 ABHD14AQ9BUJ0 271 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 PCED1AQ9H1Q7 454 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 ELL3Q9HB65 397 aaPredicted RBP9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 SERINC1Q9NRX5 453 aa9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 NXT1Q9UKK6 140 aaKnown RBP9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 UBE2J1Q9Y385 318 aaPredicted RBP9.53□□□□□ -0.88
AC055717.1-201ENST00000502221 SPTBP11277 2137 aa9.52□□□□□ -0.88
AC055717.1-201ENST00000502221 NKX2-6A6NCS4 301 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 LIPT2A6NK58 231 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 B4E171 279 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 TOX3O15405 576 aaPredicted RBP9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 VENTXO95231 258 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 CD27P26842 260 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 G0S2P27469 103 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 S100GP29377 79 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 TSPAN7P41732 249 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 GALR1P47211 349 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 PCP4P48539 62 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 CNN3Q15417 329 aaKnown RBP9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 BSXQ3C1V8 233 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 ZNF542PQ5EBM4 170 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 SLC25A24Q6NUK1 477 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 ASCL4Q6XD76 172 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 Q6ZSR6 202 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 RABEPKQ7Z6M1 372 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 GBGT1Q8N5D6 347 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 TMEM171Q8WVE6 324 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 GAL3ST4Q96RP7 486 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 C20orf144Q9BQM9 153 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 RTN4RQ9BZR6 473 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 WWTR1Q9GZV5 400 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 PNRC2Q9NPJ4 139 aaKnown RBP9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 LANCL2Q9NS86 450 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 GAB2Q9UQC2 676 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 IGKV3D-11A0A0A0MRZ8 115 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 MAP1LC3B2A6NCE7 125 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 KBTBD11O94819 623 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 HLA-HP01893 362 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 HLA-BQ31612 363 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 PHLDA2Q53GA4 152 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 WDR25Q64LD2 544 aaPredicted RBP9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 RNF144BQ7Z419 303 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 C1QL2Q7Z5L3 287 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 OR10J5Q8NHC4 309 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 KLHDC3Q9BQ90 382 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 MAP1LC3BQ9GZQ8 125 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 IL36GQ9NZH8 169 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 NAGKQ9UJ70 344 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 LAMP3Q9UQV4 416 aa9.52□□□□□ -0.89
AC055717.1-201ENST00000502221 GOLGA4Q13439 2230 aaKnown RBP9.51□□□□□ -0.89
AC055717.1-201ENST00000502221 LOC102725191A0A1B0GVB3 256 aa9.51□□□□□ -0.89
AC055717.1-201ENST00000502221 SSSCA1O60232 199 aa9.51□□□□□ -0.89
AC055717.1-201ENST00000502221 CD99P14209 185 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms