RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 TCRBV3S1A0A5B6 114 aa11.48□□□□□ -0.57
TRAF4-212ENST00000498540 NPIPB11E5RHQ5 1161 aa11.48□□□□□ -0.57
TRAF4-212ENST00000498540 H0YJX3 145 aa11.48□□□□□ -0.57
TRAF4-212ENST00000498540 LY86O95711 162 aa11.48□□□□□ -0.57
TRAF4-212ENST00000498540 FAM107AO95990 144 aa11.48□□□□□ -0.57
TRAF4-212ENST00000498540 MT-ND2P03891 347 aa11.48□□□□□ -0.57
TRAF4-212ENST00000498540 ELANEP08246 267 aa11.48□□□□□ -0.57
TRAF4-212ENST00000498540 SSTR5P35346 364 aa11.48□□□□□ -0.57
TRAF4-212ENST00000498540 NANOS3P60323 173 aaKnown RBP11.48□□□□□ -0.57
TRAF4-212ENST00000498540 CFHR3Q02985 330 aa11.48□□□□□ -0.57
TRAF4-212ENST00000498540 ZNF816Q0VGE8 651 aaPredicted RBP11.48□□□□□ -0.57
TRAF4-212ENST00000498540 PAN3Q58A45 887 aaKnown RBP11.48□□□□□ -0.57
TRAF4-212ENST00000498540 MOB3BQ86TA1 216 aa11.48□□□□□ -0.57
TRAF4-212ENST00000498540 IZUMO1Q8IYV9 350 aa11.48□□□□□ -0.57
TRAF4-212ENST00000498540 SAXO1Q8IYX7 474 aa11.48□□□□□ -0.57
TRAF4-212ENST00000498540 MRGPRDQ8TDS7 321 aa11.48□□□□□ -0.57
TRAF4-212ENST00000498540 C4orf3Q8WVX3 66 aa11.48□□□□□ -0.57
TRAF4-212ENST00000498540 UTP4Q969X6 686 aaKnown RBP11.48□□□□□ -0.57
TRAF4-212ENST00000498540 FRRS1LQ9P0K9 344 aa11.48□□□□□ -0.57
TRAF4-212ENST00000498540 SORL1Q92673 2214 aa11.48□□□□□ -0.57
TRAF4-212ENST00000498540 BIRC6Q9NR09 4857 aa11.47□□□□□ -0.57
TRAF4-212ENST00000498540 TRAV39A0A0B4J263 110 aa11.47□□□□□ -0.57
TRAF4-212ENST00000498540 CCRL2O00421 344 aa11.47□□□□□ -0.57
TRAF4-212ENST00000498540 ISG15P05161 165 aa11.47□□□□□ -0.57
TRAF4-212ENST00000498540 LYL1P12980 280 aa11.47□□□□□ -0.57
TRAF4-212ENST00000498540 C21orf33P30042 268 aaPredicted RBP11.47□□□□□ -0.57
TRAF4-212ENST00000498540 ZP1P60852 638 aa11.47□□□□□ -0.57
TRAF4-212ENST00000498540 FLOT2Q14254 428 aa11.47□□□□□ -0.57
TRAF4-212ENST00000498540 RSBN1Q5VWQ0 802 aaPredicted RBP11.47□□□□□ -0.57
TRAF4-212ENST00000498540 OR13C3Q8NGS6 347 aa11.47□□□□□ -0.57
TRAF4-212ENST00000498540 PLPPR1Q8TBJ4 325 aa11.47□□□□□ -0.57
TRAF4-212ENST00000498540 RBMXL1Q96E39 390 aaKnown RBP11.47□□□□□ -0.57
TRAF4-212ENST00000498540 NR1H4Q96RI1 486 aaPredicted RBP11.47□□□□□ -0.57
TRAF4-212ENST00000498540 HSPB9Q9BQS6 159 aa11.47□□□□□ -0.57
TRAF4-212ENST00000498540 GON7Q9BXV9 100 aa11.47□□□□□ -0.57
TRAF4-212ENST00000498540 NCOR1P1Q9H4R4 102 aa11.47□□□□□ -0.57
TRAF4-212ENST00000498540 MYRFQ9Y2G1 1151 aa11.47□□□□□ -0.57
TRAF4-212ENST00000498540 SIRT4Q9Y6E7 314 aaPredicted RBP11.47□□□□□ -0.57
TRAF4-212ENST00000498540 IGHG4P01861 327 aa11.46□□□□□ -0.57
TRAF4-212ENST00000498540 TMEM225BP0DP42 221 aa11.46□□□□□ -0.57
TRAF4-212ENST00000498540 ATP6V1E1P36543 226 aa11.46□□□□□ -0.57
TRAF4-212ENST00000498540 ASPHD1Q5U4P2 390 aa11.46□□□□□ -0.57
TRAF4-212ENST00000498540 KDM4DQ6B0I6 523 aa11.46□□□□□ -0.57
TRAF4-212ENST00000498540 OVCH2Q7RTZ1 564 aa11.46□□□□□ -0.57
TRAF4-212ENST00000498540 OR11H1Q8NG94 326 aa11.46□□□□□ -0.57
TRAF4-212ENST00000498540 CNIH3Q8TBE1 160 aa11.46□□□□□ -0.57
TRAF4-212ENST00000498540 PLSCR3Q9NRY6 295 aa11.46□□□□□ -0.57
TRAF4-212ENST00000498540 RRP9O43818 475 aaKnown RBP11.45□□□□□ -0.58
TRAF4-212ENST00000498540 MPZL2O60487 215 aa11.45□□□□□ -0.58
TRAF4-212ENST00000498540 GAPDHP04406 335 aaKnown RBP11.45□□□□□ -0.58
TRAF4-212ENST00000498540 PSMB8P28062 276 aa11.45□□□□□ -0.58
TRAF4-212ENST00000498540 MTNR1BP49286 362 aa11.45□□□□□ -0.58
TRAF4-212ENST00000498540 KISS1Q15726 138 aa11.45□□□□□ -0.58
TRAF4-212ENST00000498540 ZSCAN26Q16670 478 aa11.45□□□□□ -0.58
TRAF4-212ENST00000498540 FDX2Q6P4F2 183 aa11.45□□□□□ -0.58
TRAF4-212ENST00000498540 SLC16A12Q6ZSM3 486 aa11.45□□□□□ -0.58
TRAF4-212ENST00000498540 TMEM104Q8NE00 496 aa11.45□□□□□ -0.58
TRAF4-212ENST00000498540 OR2T10Q8NGZ9 312 aa11.45□□□□□ -0.58
TRAF4-212ENST00000498540 EME1Q96AY2 570 aa11.45□□□□□ -0.58
TRAF4-212ENST00000498540 S1PR3Q99500 378 aa11.45□□□□□ -0.58
TRAF4-212ENST00000498540 BARHL1Q9BZE3 327 aa11.45□□□□□ -0.58
TRAF4-212ENST00000498540 ZCCHC4Q9H5U6 513 aa11.45□□□□□ -0.58
TRAF4-212ENST00000498540 PALMDQ9NP74 551 aa11.45□□□□□ -0.58
TRAF4-212ENST00000498540 ZNF581Q9P0T4 197 aa11.45□□□□□ -0.58
TRAF4-212ENST00000498540 CSMD3Q7Z407 3707 aa11.45□□□□□ -0.58
TRAF4-212ENST00000498540 ZNF736B4DX44 427 aaPredicted RBP11.44□□□□□ -0.58
TRAF4-212ENST00000498540 HCKP08631 526 aa11.44□□□□□ -0.58
TRAF4-212ENST00000498540 FRMD6-AS1P0C7T7 363 aa11.44□□□□□ -0.58
TRAF4-212ENST00000498540 DBTP11182 482 aaKnown RBP11.44□□□□□ -0.58
TRAF4-212ENST00000498540 VDAC1P21796 283 aa11.44□□□□□ -0.58
TRAF4-212ENST00000498540 POLR2IP36954 125 aaKnown RBP11.44□□□□□ -0.58
TRAF4-212ENST00000498540 PAX5Q02548 391 aa11.44□□□□□ -0.58
TRAF4-212ENST00000498540 LPCAT4Q643R3 524 aa11.44□□□□□ -0.58
TRAF4-212ENST00000498540 ZFAND6Q6FIF0 208 aa11.44□□□□□ -0.58
TRAF4-212ENST00000498540 ELP2Q6IA86 826 aa11.44□□□□□ -0.58
TRAF4-212ENST00000498540 FAM53AQ6NSI3 398 aaPredicted RBP11.44□□□□□ -0.58
TRAF4-212ENST00000498540 FAM71E2Q8N5Q1 922 aa11.44□□□□□ -0.58
TRAF4-212ENST00000498540 OR10A7Q8NGE5 316 aa11.44□□□□□ -0.58
TRAF4-212ENST00000498540 MYOZ3Q8TDC0 251 aa11.44□□□□□ -0.58
TRAF4-212ENST00000498540 KCTD7Q96MP8 289 aa11.44□□□□□ -0.58
TRAF4-212ENST00000498540 RASL11BQ9BPW5 248 aa11.44□□□□□ -0.58
TRAF4-212ENST00000498540 GNB4Q9HAV0 340 aa11.44□□□□□ -0.58
TRAF4-212ENST00000498540 OR4C45A6NMZ5 311 aa11.43□□□□□ -0.58
TRAF4-212ENST00000498540 G3V2T6 193 aa11.43□□□□□ -0.58
TRAF4-212ENST00000498540 MOSP00540 346 aa11.43□□□□□ -0.58
TRAF4-212ENST00000498540 HTR1AP08908 422 aa11.43□□□□□ -0.58
TRAF4-212ENST00000498540 INSL3P51460 131 aa11.43□□□□□ -0.58
TRAF4-212ENST00000498540 F2RL1P55085 397 aa11.43□□□□□ -0.58
TRAF4-212ENST00000498540 PIGYQ3MUY2 71 aa11.43□□□□□ -0.58
TRAF4-212ENST00000498540 ZNF691Q5VV52 312 aa11.43□□□□□ -0.58
TRAF4-212ENST00000498540 OR10K1Q8NGX5 313 aa11.43□□□□□ -0.58
TRAF4-212ENST00000498540 UBALD1Q8TB05 177 aa11.43□□□□□ -0.58
TRAF4-212ENST00000498540 RTN4IP1Q8WWV3 396 aaPredicted RBP11.43□□□□□ -0.58
TRAF4-212ENST00000498540 ST6GALNAC6Q969X2 333 aa11.43□□□□□ -0.58
TRAF4-212ENST00000498540 CIB1Q99828 191 aa11.43□□□□□ -0.58
TRAF4-212ENST00000498540 GABARAPL1Q9H0R8 117 aa11.43□□□□□ -0.58
TRAF4-212ENST00000498540 KLK15Q9H2R5 256 aa11.43□□□□□ -0.58
TRAF4-212ENST00000498540 ISYNA1Q9NPH2 558 aa11.43□□□□□ -0.58
TRAF4-212ENST00000498540 POMPQ9Y244 141 aa11.43□□□□□ -0.58
TRAF4-212ENST00000498540 DNAH1Q9P2D7 4330 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms