RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 OR10S1Q8NGN2 331 aa9.23□□□□□ -0.93
TRAPPC12-223ENST00000497597 CMTM2Q8TAZ6 248 aa9.23□□□□□ -0.93
TRAPPC12-223ENST00000497597 GATAD1Q8WUU5 269 aa9.23□□□□□ -0.93
TRAPPC12-223ENST00000497597 SPOCK3Q9BQ16 436 aa9.23□□□□□ -0.93
TRAPPC12-223ENST00000497597 SDF2L1Q9HCN8 221 aa9.23□□□□□ -0.93
TRAPPC12-223ENST00000497597 Q9N2K0 584 aa9.23□□□□□ -0.93
TRAPPC12-223ENST00000497597 KCNS2Q9ULS6 477 aa9.23□□□□□ -0.93
TRAPPC12-223ENST00000497597 PGPEP1LA6NFU8 196 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 PROB1E7EW31 1015 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 HOXB2P14652 356 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 LMO1P25800 156 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 ZXDAP98168 799 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 FAM90A2PQ658T7 463 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 Q6ZSR6 202 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 TMPRSS7Q7RTY8 843 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 TBC1D26Q86UD7 250 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 CPEB3Q8NE35 698 aaKnown RBP9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 PIGCQ92535 297 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 ACTR3CQ9C0K3 210 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 FRYLO94915 3013 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 PATE4P0C8F1 98 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 PNRC1Q12796 327 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 MYBPHQ13203 477 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 VAMP3Q15836 100 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 CNKSR3Q6P9H4 555 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 PTPMT1Q8WUK0 201 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 TMEM234Q8WY98 164 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 ELSPBP1Q96BH3 223 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 ASCL3Q9NQ33 180 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 B4DEV8 164 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 FOXS1O43638 330 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 OTX2P32243 289 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 PSMB3P49720 205 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 KCNIP4Q6PIL6 250 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 Q6ZN92 141 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 OR1L6Q8NGR2 347 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 ASB10Q8WXI3 467 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 RPP25Q9BUL9 199 aaKnown RBP9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 ST3GAL6Q9Y274 331 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 LHFPL6Q9Y693 200 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 NBEAQ8NFP9 2946 aa9.22□□□□□ -0.93
TRAPPC12-223ENST00000497597 IGHV3-15A0A0B4J1V0 119 aa9.21□□□□□ -0.93
TRAPPC12-223ENST00000497597 ADH1BP00325 375 aa9.21□□□□□ -0.93
TRAPPC12-223ENST00000497597 IGHG1P01857 330 aa9.21□□□□□ -0.93
TRAPPC12-223ENST00000497597 FOXF1Q12946 379 aa9.21□□□□□ -0.93
TRAPPC12-223ENST00000497597 MALLQ13021 153 aa9.21□□□□□ -0.93
TRAPPC12-223ENST00000497597 RUNX3Q13761 415 aa9.21□□□□□ -0.93
TRAPPC12-223ENST00000497597 R3HDM4Q96D70 268 aa9.21□□□□□ -0.93
TRAPPC12-223ENST00000497597 TMEM9BQ9NQ34 198 aa9.21□□□□□ -0.93
TRAPPC12-223ENST00000497597 NAT8Q9UHE5 227 aa9.21□□□□□ -0.93
TRAPPC12-223ENST00000497597 VAX2Q9UIW0 290 aa9.21□□□□□ -0.93
TRAPPC12-223ENST00000497597 RP1L1Q8IWN7 2480 aaPredicted RBP9.21□□□□□ -0.93
TRAPPC12-223ENST00000497597 TRAV39A0A0B4J263 110 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 CD300LBA8K4G0 201 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 MPPED1O15442 326 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 PITX3O75364 302 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 THBS3P49746 956 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 GAPTQ8N292 157 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 OR4C5Q8NGB2 326 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 MRPL30Q8TCC3 161 aaKnown RBP9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 C22orf15Q8WYQ4 148 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 SLC7A10Q9NS82 523 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 MS4A18H0YCH9 400 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 CLDN1O95832 211 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 GCH1P30793 250 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 CCKARP32238 428 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 HNRNPA3P51991 378 aaKnown RBP9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 GFERP55789 205 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 TAS2R30P59541 319 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 MS4A18Q3C1V0 323 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 ACOT6Q3I5F7 207 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 COL5A1-AS1Q5SY13 56 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 LHX8Q68G74 356 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 MRPL43Q8N983 215 aaKnown RBP9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 RCC1LQ96I51 464 aaKnown RBP9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 C1orf147Q96MC9 270 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 SMDT1Q9H4I9 107 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 MANBALQ9NQG1 85 aa9.21□□□□□ -0.94
TRAPPC12-223ENST00000497597 TPRP12270 2363 aaKnown RBP9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 IGHV3-64DA0A0J9YX35 117 aa9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 TOX3O15405 576 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 NUPR1O60356 82 aa9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 DXOO77932 396 aaKnown RBP9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 TMEM50AO95807 157 aa9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 MRPS11P82912 194 aaKnown RBP9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 TMEM183BQ1AE95 376 aa9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 HLA-BQ31612 363 aa9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 SLC46A1Q96NT5 459 aa9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 CCL28Q9NRJ3 127 aa9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 CXorf51AA0A1B0GTR3 108 aa9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 PAGE4O60829 102 aa9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 PPYP01298 95 aa9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 GYPAP02724 150 aa9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 CEACAM8P31997 349 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 SLC35B1P78383 322 aa9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 SPINK9Q5DT21 86 aa9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 DCAF10Q5QP82 559 aa9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 FAM69BQ5VUD6 431 aa9.2□□□□□ -0.94
TRAPPC12-223ENST00000497597 DEGS2Q6QHC5 323 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms