RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 H7C1Q1 480 aa15.12■□□□□ 0.01
RGP1-202ENST00000496906 FCGR3AP08637 254 aa15.12■□□□□ 0.01
RGP1-202ENST00000496906 DGCR2P98153 550 aa15.12■□□□□ 0.01
RGP1-202ENST00000496906 RNASE12Q5GAN4 147 aaKnown RBP15.12■□□□□ 0.01
RGP1-202ENST00000496906 TRAPPC6BQ86SZ2 158 aa15.12■□□□□ 0.01
RGP1-202ENST00000496906 WFDC11Q8NEX6 87 aa15.12■□□□□ 0.01
RGP1-202ENST00000496906 OR4K15Q8NH41 348 aa15.12■□□□□ 0.01
RGP1-202ENST00000496906 SDHCQ99643 169 aaPredicted RBP15.12■□□□□ 0.01
RGP1-202ENST00000496906 NCOR1P1Q9H4R4 102 aa15.12■□□□□ 0.01
RGP1-202ENST00000496906 CHMP1AQ9HD42 196 aaPredicted RBP15.12■□□□□ 0.01
RGP1-202ENST00000496906 AKAP9Q99996 3911 aa15.12■□□□□ 0.01
RGP1-202ENST00000496906 MEIKINA0A087WXM9 373 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 A8MXK9 166 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 PHF1O43189 567 aaPredicted RBP15.11■□□□□ 0.01
RGP1-202ENST00000496906 GSTZ1O43708 216 aaPredicted RBP15.11■□□□□ 0.01
RGP1-202ENST00000496906 DTYMKP23919 212 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 ZNF846Q147U1 533 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 ZNF880Q6PDB4 577 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 Q8N402 240 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 GDPD1Q8N9F7 314 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 H1FXQ92522 213 aaKnown RBP15.11■□□□□ 0.01
RGP1-202ENST00000496906 DCTN5Q9BTE1 182 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 C19orf12Q9NSK7 152 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 TRBV23-1A0A0A0MS06 115 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 MEIS3P1A6NDR6 274 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 POM121CA8CG34 1229 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 KIAA1324LA8MWY0 1029 aaPredicted RBP15.11■□□□□ 0.01
RGP1-202ENST00000496906 HEXAP06865 529 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 CBX5P45973 191 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 RPL31P62899 125 aaKnown RBP15.11■□□□□ 0.01
RGP1-202ENST00000496906 LOXL1Q08397 574 aaPredicted RBP15.11■□□□□ 0.01
RGP1-202ENST00000496906 C11orf91Q3C1V1 193 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 BTN2A1Q7KYR7 527 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 TCF23Q7RTU1 214 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 CCDC107Q8WV48 283 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 FCAMRQ8WWV6 532 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 OCSTAMPQ9BR26 566 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 REG4Q9BYZ8 158 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 MBNL3Q9NUK0 354 aaKnown RBP15.11■□□□□ 0.01
RGP1-202ENST00000496906 ZNF230Q9UIE0 474 aaPredicted RBP15.11■□□□□ 0.01
RGP1-202ENST00000496906 TRAPPC2LQ9UL33 140 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 ANAPC10Q9UM13 185 aa15.11■□□□□ 0.01
RGP1-202ENST00000496906 TRAV39A0A0B4J263 110 aa15.1■□□□□ 0.01
RGP1-202ENST00000496906 C22orf46C9J442 243 aa15.1■□□□□ 0.01
RGP1-202ENST00000496906 FAM157AC9JC47 383 aa15.1■□□□□ 0.01
RGP1-202ENST00000496906 RNF223E7ERA6 249 aa15.1■□□□□ 0.01
RGP1-202ENST00000496906 RCC1P18754 421 aaPredicted RBP15.1■□□□□ 0.01
RGP1-202ENST00000496906 ZFP36P26651 326 aaKnown RBP15.1■□□□□ 0.01
RGP1-202ENST00000496906 CD40LGP29965 261 aa15.1■□□□□ 0.01
RGP1-202ENST00000496906 PPP5CP53041 499 aa15.1■□□□□ 0.01
RGP1-202ENST00000496906 MEF2CQ06413 473 aaPredicted RBP15.1■□□□□ 0.01
RGP1-202ENST00000496906 MOB1BQ7L9L4 216 aa15.1■□□□□ 0.01
RGP1-202ENST00000496906 GVQW1Q8N7I0 195 aa15.1■□□□□ 0.01
RGP1-202ENST00000496906 OR13A1Q8NGR1 328 aa15.1■□□□□ 0.01
RGP1-202ENST00000496906 C8orf46Q8TAG6 207 aa15.1■□□□□ 0.01
RGP1-202ENST00000496906 Q9N2K0 584 aa15.1■□□□□ 0.01
RGP1-202ENST00000496906 KLK11Q9UBX7 282 aa15.1■□□□□ 0.01
RGP1-202ENST00000496906 MTFP1Q9UDX5 166 aa15.1■□□□□ 0.01
RGP1-202ENST00000496906 RBMX2Q9Y388 322 aaKnown RBP15.1■□□□□ 0.01
RGP1-202ENST00000496906 hADV38S2A0JD32 116 aa15.09■□□□□ 0.01
RGP1-202ENST00000496906 MEX3AA1L020 520 aaKnown RBP15.09■□□□□ 0.01
RGP1-202ENST00000496906 ECDO95905 644 aaPredicted RBP15.09■□□□□ 0.01
RGP1-202ENST00000496906 GLP1RP43220 463 aa15.09■□□□□ 0.01
RGP1-202ENST00000496906 CR1LQ2VPA4 569 aa15.09■□□□□ 0.01
RGP1-202ENST00000496906 SETD6Q8TBK2 473 aa15.09■□□□□ 0.01
RGP1-202ENST00000496906 MAFIPQ8WZ33 124 aa15.09■□□□□ 0.01
RGP1-202ENST00000496906 TRIM63Q969Q1 353 aa15.09■□□□□ 0.01
RGP1-202ENST00000496906 OR6C3Q9NZP0 311 aa15.09■□□□□ 0.01
RGP1-202ENST00000496906 LPAR3Q9UBY5 353 aa15.09■□□□□ 0.01
RGP1-202ENST00000496906 RPUSD1Q9UJJ7 312 aaKnown RBP15.09■□□□□ 0.01
RGP1-202ENST00000496906 LINC00312Q9Y6C7 94 aa15.09■□□□□ 0.01
RGP1-202ENST00000496906 MED13LQ71F56 2210 aa15.09■□□□□ 0.01
RGP1-202ENST00000496906 TRGV10A0A0A0MS01 117 aa15.08■□□□□ 0
RGP1-202ENST00000496906 J3QRK9 145 aa15.08■□□□□ 0
RGP1-202ENST00000496906 LANCL1O43813 399 aa15.08■□□□□ 0
RGP1-202ENST00000496906 ZNF273Q14593 569 aa15.08■□□□□ 0
RGP1-202ENST00000496906 BAK1Q16611 211 aa15.08■□□□□ 0
RGP1-202ENST00000496906 SRSF7Q16629 238 aaKnown RBP eCLIP15.08■□□□□ 0
RGP1-202ENST00000496906 CD276Q5ZPR3 534 aa15.08■□□□□ 0
RGP1-202ENST00000496906 TMEM200BQ69YZ2 307 aa15.08■□□□□ 0
RGP1-202ENST00000496906 Q6ZS49 121 aa15.08■□□□□ 0
RGP1-202ENST00000496906 HOGA1Q86XE5 327 aa15.08■□□□□ 0
RGP1-202ENST00000496906 FAM185AQ8N0U4 392 aa15.08■□□□□ 0
RGP1-202ENST00000496906 MRGPRDQ8TDS7 321 aa15.08■□□□□ 0
RGP1-202ENST00000496906 CORO2AQ92828 525 aa15.08■□□□□ 0
RGP1-202ENST00000496906 THAP7Q9BT49 309 aaPredicted RBP15.08■□□□□ 0
RGP1-202ENST00000496906 CCDC32Q9BV29 185 aa15.08■□□□□ 0
RGP1-202ENST00000496906 ST6GALNAC5Q9BVH7 336 aa15.08■□□□□ 0
RGP1-202ENST00000496906 IFT46Q9NQC8 304 aa15.08■□□□□ 0
RGP1-202ENST00000496906 DOCK11Q5JSL3 2073 aa15.08■□□□□ 0
RGP1-202ENST00000496906 MYO9AB2RTY4 2548 aa15.08■□□□□ 0
RGP1-202ENST00000496906 LOC105371242A0A075B767 164 aa15.07■□□□□ 0
RGP1-202ENST00000496906 ORC5O43913 435 aa15.07■□□□□ 0
RGP1-202ENST00000496906 FOXH1O75593 365 aa15.07■□□□□ 0
RGP1-202ENST00000496906 RBBP9O75884 186 aa15.07■□□□□ 0
RGP1-202ENST00000496906 FCER2P06734 321 aa15.07■□□□□ 0
RGP1-202ENST00000496906 GDNFP39905 211 aa15.07■□□□□ 0
RGP1-202ENST00000496906 ACTBP60709 375 aa15.07■□□□□ 0
RGP1-202ENST00000496906 ACTG1P63261 375 aa15.07■□□□□ 0
RGP1-202ENST00000496906 LCN2P80188 198 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms