RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 CRYBA4P53673 196 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 MEF2CQ06413 473 aaPredicted RBP3.18□□□□□ -1.9
SNX13-211ENST00000496855 PSG7Q13046 419 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 ORMDL2Q53FV1 153 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 TCEAL5Q5H9L2 206 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 CLLU1OSQ5K130 101 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 TNFAIP8L2Q6P589 184 aaPredicted RBP3.18□□□□□ -1.9
SNX13-211ENST00000496855 FAM131AQ6UXB0 335 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 FAM172AQ8WUF8 416 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 DCAKDQ8WVC6 231 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 TCEAL3Q969E4 200 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 TMEM101Q96IK0 257 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 TIMM17AQ99595 171 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 MED18Q9BUE0 208 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 TSGA10Q9BZW7 698 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 CA10Q9NS85 328 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 DEC1Q9P2X7 70 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 OR12D3Q9UGF7 316 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 SMPXQ9UHP9 88 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 PSG11Q9UQ72 335 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 ENPP4Q9Y6X5 453 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 NRCAMQ92823 1304 aa3.18□□□□□ -1.9
SNX13-211ENST00000496855 KDM6BO15054 1643 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 ROCK1Q13464 1354 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 CAMSAP1Q5T5Y3 1602 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 TRAV8-3A0A0A6YYJ7 113 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 OR6C6A6NF89 314 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 DISC1C4P0D8 188 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 GABARAPO95166 117 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 PRTN3P24158 256 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 MAGEA12P43365 314 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 PSMB2P49721 201 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 ZNF136P52737 540 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 SLC18A1P54219 525 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 PSME3P61289 254 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 GRB2P62993 217 aaKnown RBP3.17□□□□□ -1.9
SNX13-211ENST00000496855 RUNX1Q01196 453 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 IFITM3Q01628 133 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 PTGES3Q15185 160 aaKnown RBP3.17□□□□□ -1.9
SNX13-211ENST00000496855 MAPK14Q16539 360 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 HIST3H3Q16695 136 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 LINC00303Q3SY05 128 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 ALKAL1Q6UXT8 129 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 SPNS3Q6ZMD2 512 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 GLT6D1Q7Z4J2 308 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 GALNT10Q86SR1 603 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 NAA40Q86UY6 237 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 SLC26A10Q8NG04 563 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 RDH5Q92781 318 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 BMFQ96LC9 184 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 ZNF436Q9C0F3 470 aaPredicted RBP3.17□□□□□ -1.9
SNX13-211ENST00000496855 POLR1DQ9Y2S0 133 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 PRELID3BQ9Y3B1 194 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 YTHDF2Q9Y5A9 579 aaKnown RBP3.17□□□□□ -1.9
SNX13-211ENST00000496855 DYSFO75923 2080 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 KIF13AQ9H1H9 1805 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 NESP48681 1621 aa3.17□□□□□ -1.9
SNX13-211ENST00000496855 PINLYPA6NC86 204 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 PGPA6NDG6 321 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 ISLRO14498 428 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 GYG2O15488 501 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 MMP23AO75900 390 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 ARL6IP5O75915 188 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 MT-ND4P03905 459 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 HLA-DPB1P04440 258 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 IL3P08700 152 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 KCNE1P15382 129 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 MDKP21741 143 aaPredicted RBP3.16□□□□□ -1.9
SNX13-211ENST00000496855 OMGP23515 440 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 RCVRNP35243 200 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 C1DQ13901 141 aaKnown RBP3.16□□□□□ -1.9
SNX13-211ENST00000496855 IL17AQ16552 155 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 TMEM183BQ1AE95 376 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 ZNF684Q5T5D7 378 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 ZNF429Q86V71 674 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 TMEM183AQ8IXX5 376 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 SLC25A45Q8N413 288 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 OR1L8Q8NGR8 309 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 ZNRF2Q8NHG8 242 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 ZNF420Q8TAQ5 688 aaPredicted RBP3.16□□□□□ -1.9
SNX13-211ENST00000496855 PTX4Q96A99 478 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 EBPLQ9BY08 206 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 GNB1LQ9BYB4 327 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 TXNIPQ9H3M7 391 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 TRABDQ9H4I3 376 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 ZSCAN16Q9H4T2 348 aaPredicted RBP3.16□□□□□ -1.9
SNX13-211ENST00000496855 WFDC1Q9HC57 220 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 SETD1AO15047 1707 aaKnown RBP3.16□□□□□ -1.9
SNX13-211ENST00000496855 DNMT1P26358 1616 aaKnown RBP3.16□□□□□ -1.9
SNX13-211ENST00000496855 MEGF6O75095 1541 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 TET2Q6N021 2002 aaPredicted RBP3.16□□□□□ -1.9
SNX13-211ENST00000496855 TSPOAP1O95153 1857 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 GNG14A0A1W2PPG7 69 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 ZNF705GA8MUZ8 300 aaPredicted RBP3.16□□□□□ -1.9
SNX13-211ENST00000496855 KCNK2O95069 426 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 LINC00614P0C842 121 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 CECR9P0C854 216 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 CYBAP13498 195 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 CRISP2P16562 243 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 SLC6A1P30531 599 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms