RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ST3GAL6Q9Y274 331 aa11.39□□□□□ -0.59
VTI1A-209ENST00000496445 TRAV39A0A0B4J263 110 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 A0A1W2PP11 408 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 IRGMA1A4Y4 181 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 NPIPB11E5RHQ5 1161 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 GEMIN2O14893 280 aaKnown RBP11.38□□□□□ -0.59
VTI1A-209ENST00000496445 PEX14O75381 377 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 IGHV3-7P01780 117 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 MYL12AP19105 171 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 BDKRB2P30411 391 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 SSTR5P35346 364 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 CEACAM3P40198 252 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 KCNJ3P48549 501 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 PRRX1P54821 245 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 PPP3R1P63098 170 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 DIAPH2-AS1Q14236 149 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 ABCA11PQ4W5N1 156 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 TTC23Q5W5X9 447 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 LAIR2Q6ISS4 152 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 OSR2Q8N2R0 312 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 PACRGLQ8N7B6 248 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 GGHQ92820 318 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 GHSRQ92847 366 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 CREB3L1Q96BA8 519 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 TMEM80Q96HE8 168 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 DPCDQ9BVM2 203 aaPredicted RBP11.38□□□□□ -0.59
VTI1A-209ENST00000496445 BARHL1Q9BZE3 327 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 DNAH9Q9NYC9 4486 aa11.38□□□□□ -0.59
VTI1A-209ENST00000496445 TRAV8-7A0A075B6U6 113 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 A0A1W2PPI3 338 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 FAM90A18PA6NE21 464 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 FAM90A16PA6NEW6 464 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 FAM90A20PA6NIJ5 464 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 FAM90A9PA6NNJ1 464 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 FAM90A12PA8MX19 464 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 FAM90A5PA8MXJ8 464 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 OOSP1A8MZH6 123 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 J3QR06 171 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 OR7C1O76099 320 aaPredicted RBP11.37□□□□□ -0.59
VTI1A-209ENST00000496445 GNAO1P09471 354 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 FAM90A15PP0C7V4 464 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 FAM90A13PP0C7W8 464 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 FAM90A14PP0C7W9 464 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 FAM90A24PP0C7X0 464 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 SERPINA2P20848 420 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 C21orf33P30042 268 aaPredicted RBP11.37□□□□□ -0.59
VTI1A-209ENST00000496445 ARHGDIBP52566 201 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 CD83Q01151 205 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 RIPK1Q13546 671 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 LTC4SQ16873 150 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 Q499Y3 187 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 TCTEX1D4Q5JR98 221 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 ZNF565Q8N9K5 539 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 OR5AU1Q8NGC0 362 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 RFESDQ8TAC1 157 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 TOMM40LQ969M1 308 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 R3HDM4Q96D70 268 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 AKR1E2Q96JD6 320 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 ZNF184Q99676 751 aaPredicted RBP11.37□□□□□ -0.59
VTI1A-209ENST00000496445 METTL9Q9H1A3 318 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 ING4Q9UNL4 249 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 PSG11Q9UQ72 335 aa11.37□□□□□ -0.59
VTI1A-209ENST00000496445 TRBV5-7A0A0A0MS05 114 aa11.36□□□□□ -0.59
VTI1A-209ENST00000496445 GPX5O75715 221 aa11.36□□□□□ -0.59
VTI1A-209ENST00000496445 PRB2P02812 416 aaPredicted RBP11.36□□□□□ -0.59
VTI1A-209ENST00000496445 LPLP06858 475 aa11.36□□□□□ -0.59
VTI1A-209ENST00000496445 FSTP19883 344 aa11.36□□□□□ -0.59
VTI1A-209ENST00000496445 GNG10P50151 68 aa11.36□□□□□ -0.59
VTI1A-209ENST00000496445 EMX1Q04741 257 aaPredicted RBP11.36□□□□□ -0.59
VTI1A-209ENST00000496445 RCN1Q15293 331 aa11.36□□□□□ -0.59
VTI1A-209ENST00000496445 YIF1BQ5BJH7 314 aa11.36□□□□□ -0.59
VTI1A-209ENST00000496445 CCDC144NLQ6NUI1 221 aa11.36□□□□□ -0.59
VTI1A-209ENST00000496445 C10orf99Q6UWK7 81 aa11.36□□□□□ -0.59
VTI1A-209ENST00000496445 LINC00596Q86U02 117 aa11.36□□□□□ -0.59
VTI1A-209ENST00000496445 DHRSXQ8N5I4 330 aa11.36□□□□□ -0.59
VTI1A-209ENST00000496445 SETD9Q8NE22 299 aa11.36□□□□□ -0.59
VTI1A-209ENST00000496445 OR4F17Q8NGA8 305 aa11.36□□□□□ -0.59
VTI1A-209ENST00000496445 RPEQ96AT9 228 aa11.36□□□□□ -0.59
VTI1A-209ENST00000496445 OR14A2Q96R54 314 aa11.36□□□□□ -0.59
VTI1A-209ENST00000496445 OR4F4Q96R69 305 aa11.36□□□□□ -0.59
VTI1A-209ENST00000496445 C8orf4Q9NR00 106 aa11.36□□□□□ -0.59
VTI1A-209ENST00000496445 AMMECR1Q9Y4X0 333 aaPredicted RBP11.36□□□□□ -0.59
VTI1A-209ENST00000496445 A0A1W2PPE3 182 aa11.35□□□□□ -0.59
VTI1A-209ENST00000496445 A0A1W2PRX2 142 aa11.35□□□□□ -0.59
VTI1A-209ENST00000496445 H3BUI4 141 aa11.35□□□□□ -0.59
VTI1A-209ENST00000496445 XPNPEP2O43895 674 aa11.35□□□□□ -0.59
VTI1A-209ENST00000496445 CSTBP04080 98 aaKnown RBP11.35□□□□□ -0.59
VTI1A-209ENST00000496445 SNRNP70P08621 437 aaKnown RBP11.35□□□□□ -0.59
VTI1A-209ENST00000496445 MNDAP41218 407 aa11.35□□□□□ -0.59
VTI1A-209ENST00000496445 ST3GAL4Q11206 333 aa11.35□□□□□ -0.59
VTI1A-209ENST00000496445 SLC22A6Q4U2R8 563 aa11.35□□□□□ -0.59
VTI1A-209ENST00000496445 OXLD1Q5BKU9 147 aa11.35□□□□□ -0.59
VTI1A-209ENST00000496445 DRAM1Q8N682 238 aa11.35□□□□□ -0.59
VTI1A-209ENST00000496445 OR10A7Q8NGE5 316 aa11.35□□□□□ -0.59
VTI1A-209ENST00000496445 OR56B4Q8NH76 319 aa11.35□□□□□ -0.59
VTI1A-209ENST00000496445 FBLIM1Q8WUP2 373 aa11.35□□□□□ -0.59
VTI1A-209ENST00000496445 CAPSLQ8WWF8 208 aa11.35□□□□□ -0.59
VTI1A-209ENST00000496445 CYYR1Q96J86 154 aa11.35□□□□□ -0.59
VTI1A-209ENST00000496445 PLA2G2EQ9NZK7 142 aa11.35□□□□□ -0.59
VTI1A-209ENST00000496445 MOB4Q9Y3A3 225 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms