RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 OR5R1Q8NH85 324 aa13.37□□□□□ -0.27
SF3A1-209ENST00000496189 C1orf147Q96MC9 270 aaPredicted RBP13.37□□□□□ -0.27
SF3A1-209ENST00000496189 BANF2Q9H503 90 aa13.37□□□□□ -0.27
SF3A1-209ENST00000496189 ZNRD1Q9P1U0 126 aa13.37□□□□□ -0.27
SF3A1-209ENST00000496189 SESN1Q9Y6P5 492 aa13.37□□□□□ -0.27
SF3A1-209ENST00000496189 MEIKINA0A087WXM9 373 aa13.36□□□□□ -0.27
SF3A1-209ENST00000496189 TMEM89A2RUT3 159 aa13.36□□□□□ -0.27
SF3A1-209ENST00000496189 AIREO43918 545 aa13.36□□□□□ -0.27
SF3A1-209ENST00000496189 MPIG6BO95866 241 aa13.36□□□□□ -0.27
SF3A1-209ENST00000496189 ARG1P05089 322 aa13.36□□□□□ -0.27
SF3A1-209ENST00000496189 IER3P46695 156 aa13.36□□□□□ -0.27
SF3A1-209ENST00000496189 GLIPR1P48060 266 aa13.36□□□□□ -0.27
SF3A1-209ENST00000496189 RPL15P61313 204 aaKnown RBP13.36□□□□□ -0.27
SF3A1-209ENST00000496189 RBM39Q14498 530 aaKnown RBP13.36□□□□□ -0.27
SF3A1-209ENST00000496189 TAF9Q16594 264 aa13.36□□□□□ -0.27
SF3A1-209ENST00000496189 OR2W3Q7Z3T1 314 aa13.36□□□□□ -0.27
SF3A1-209ENST00000496189 C3orf56Q8N813 242 aa13.36□□□□□ -0.27
SF3A1-209ENST00000496189 DYRK2Q92630 601 aa13.36□□□□□ -0.27
SF3A1-209ENST00000496189 FAM46BQ96A09 425 aa13.36□□□□□ -0.27
SF3A1-209ENST00000496189 URM1Q9BTM9 101 aaKnown RBP13.36□□□□□ -0.27
SF3A1-209ENST00000496189 DPCDQ9BVM2 203 aaPredicted RBP13.36□□□□□ -0.27
SF3A1-209ENST00000496189 TMEM59Q9BXS4 323 aa13.36□□□□□ -0.27
SF3A1-209ENST00000496189 STEAP1Q9UHE8 339 aa13.36□□□□□ -0.27
SF3A1-209ENST00000496189 TBL2Q9Y4P3 447 aaKnown RBP13.36□□□□□ -0.27
SF3A1-209ENST00000496189 TRAV24A0A0B4J272 114 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 A0A1W2PP11 408 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 ZNF729A6NN14 1252 aaPredicted RBP13.35□□□□□ -0.27
SF3A1-209ENST00000496189 IFITM5A6NNB3 132 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 MCRIP1C9JLW8 97 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 HAX1O00165 279 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 SMIM18P0DKX4 95 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 VSIG8P0DPA2 414 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 HKR1P10072 659 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 GLP1RP43220 463 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 DLX6P56179 175 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 P2RY14Q15391 338 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 FAM189A2Q15884 450 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 SUMF2Q8NBJ7 301 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 BEND2Q8NDZ0 799 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 TMEM104Q8NE00 496 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 CORO2AQ92828 525 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 FAM3DQ96BQ1 224 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 YIPF6Q96EC8 236 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 GFI1Q99684 422 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 CHIAQ9BZP6 476 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 TMEM133Q9H2Q1 129 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 NCOR1P1Q9H4R4 102 aa13.35□□□□□ -0.27
SF3A1-209ENST00000496189 NOTOA8MTQ0 251 aa13.34□□□□□ -0.27
SF3A1-209ENST00000496189 AIPO00170 330 aa13.34□□□□□ -0.27
SF3A1-209ENST00000496189 IGHV4-59P01825 116 aa13.34□□□□□ -0.27
SF3A1-209ENST00000496189 FUT3P21217 361 aa13.34□□□□□ -0.27
SF3A1-209ENST00000496189 CDK2P24941 298 aa13.34□□□□□ -0.27
SF3A1-209ENST00000496189 CFPP27918 469 aa13.34□□□□□ -0.27
SF3A1-209ENST00000496189 COMPP49747 757 aaPredicted RBP13.34□□□□□ -0.27
SF3A1-209ENST00000496189 OR10A3P58181 314 aa13.34□□□□□ -0.27
SF3A1-209ENST00000496189 RPS27AP62979 156 aaKnown RBP13.34□□□□□ -0.27
SF3A1-209ENST00000496189 HES5Q5TA89 166 aa13.34□□□□□ -0.27
SF3A1-209ENST00000496189 HCP5Q6MZN7 132 aa13.34□□□□□ -0.27
SF3A1-209ENST00000496189 HEPN1Q6WQI6 88 aa13.34□□□□□ -0.27
SF3A1-209ENST00000496189 RTN4RL2Q86UN3 420 aa13.34□□□□□ -0.27
SF3A1-209ENST00000496189 C11orf42Q8N5U0 333 aa13.34□□□□□ -0.27
SF3A1-209ENST00000496189 Q96M66 194 aa13.34□□□□□ -0.27
SF3A1-209ENST00000496189 CLEC7AQ9BXN2 247 aa13.34□□□□□ -0.27
SF3A1-209ENST00000496189 RAB9BQ9NP90 201 aa13.34□□□□□ -0.27
SF3A1-209ENST00000496189 ABCB10Q9NRK6 738 aa13.34□□□□□ -0.27
SF3A1-209ENST00000496189 KIF25Q9UIL4 384 aa13.34□□□□□ -0.27
SF3A1-209ENST00000496189 SHISA3A0PJX4 238 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 TMEM30CPA0ZSE6 113 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 FAM181BA6NEQ2 426 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 TMEM14DPA8MWL7 114 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 TOR1AO14656 332 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 GLAP06280 429 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 SDC2P34741 201 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 ARHGDIBP52566 201 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 LRRC75BQ2VPJ9 315 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 C2orf76Q3KRA6 126 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 OR10K2Q6IF99 312 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 RAB12Q6IQ22 244 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 TCF23Q7RTU1 214 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 OR11H6Q8NGC7 330 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 OR51D1Q8NGF3 324 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 OR13F1Q8NGS4 319 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 NDNFQ8TB73 568 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 ZNF596Q8TC21 504 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 CREB3L1Q96BA8 519 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 COQ2Q96H96 371 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 NEDD4LQ96PU5 975 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 CENPOQ9BU64 300 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 FBLN5Q9UBX5 448 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 VPREB3Q9UKI3 123 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 PEX16Q9Y5Y5 336 aa13.33□□□□□ -0.28
SF3A1-209ENST00000496189 IGHV2-26A0A0B4J1V2 119 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 A0A1B0GUS0 222 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 CLDN12P56749 244 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 QRFPP83859 136 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 PAX5Q02548 391 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 AANATQ16613 207 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 MINOS1Q5TGZ0 78 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 PRAMEF5Q5TYX0 476 aa13.32□□□□□ -0.28
SF3A1-209ENST00000496189 ZNF626Q68DY1 528 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms